DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PRE9

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_011651.3 Gene:PRE9 / 853036 SGDID:S000003367 Length:258 Species:Saccharomyces cerevisiae


Alignment Length:183 Identity:47/183 - (25%)
Similarity:85/183 - (46%) Gaps:17/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YEPPKAIKT----GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAAD 99
            |:...|:::    ||:| ||:..||::|.|:.:.|...:..|.:..|::.|.|.|....||..||
Yeast    20 YQVEYALESISHAGTAI-GIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTAD 83

  Fly   100 TEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH--------IGAALVMGGVDTT-G 155
            .|::..|.......:.......:||   .:::||.....||:        .|.:.:..|.|.. |
Yeast    84 AEILINTARIHAQNYLKTYNEDIPV---EILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYG 145

  Fly   156 PQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAIS 208
            .|||...|.|:.......::|:.|.||.::|:..:|.|:.::...:|..:.:|
Yeast   146 YQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 44/169 (26%)
Pr_beta_C 240..274 CDD:463597
PRE9NP_011651.3 proteasome_alpha_type_4 4..216 CDD:239721 47/183 (26%)
Blue background indicates that the domain is not in the aligned region.

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