DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PRE9

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_011651.3 Gene:PRE9 / 853036 SGDID:S000003367 Length:258 Species:Saccharomyces cerevisiae


Alignment Length:183 Identity:47/183 - (25%)
Similarity:85/183 - (46%) Gaps:17/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YEPPKAIKT----GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAAD 99
            |:...|:::    ||:| ||:..||::|.|:.:.|...:..|.:..|::.|.|.|....||..||
Yeast    20 YQVEYALESISHAGTAI-GIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTAD 83

  Fly   100 TEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH--------IGAALVMGGVDTT-G 155
            .|::..|.......:.......:||   .:::||.....||:        .|.:.:..|.|.. |
Yeast    84 AEILINTARIHAQNYLKTYNEDIPV---EILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYG 145

  Fly   156 PQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAIS 208
            .|||...|.|:.......::|:.|.||.::|:..:|.|:.::...:|..:.:|
Yeast   146 YQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 45/170 (26%)
proteasome_beta_type_7 49..236 CDD:239732 44/169 (26%)
Pr_beta_C 241..274 CDD:289249
PRE9NP_011651.3 proteasome_alpha_type_4 4..216 CDD:239721 47/183 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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