DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PBE1

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001184978.1 Gene:PBE1 / 837863 AraportID:AT1G13060 Length:298 Species:Arabidopsis thaliana


Alignment Length:217 Identity:66/217 - (30%)
Similarity:100/217 - (46%) Gaps:25/217 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTRATEGPIVSD---KNCSKIHHLQDHI-------------------Y 90
            ||:.:..|:|.||::.||:||:.|..:|.   ||.||..|..|.:                   |
plant    57 GTTTLAFIFKGGVMVAADSRASMGGYISVSSLKNSSKNMHPFDIVDFGRNTTSQSVKKIIEINPY 121

  Fly    91 CCG--AGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQG-HIGAALVMGGVD 152
            ..|  ||.|||.:........:..||.|..:||:.|..||.:|...|:.|:| .:....::.|.|
plant   122 MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD 186

  Fly   153 TTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGS 217
            .|||.||.:...|...|....::|||:..|..||:.|:|.|:.:|:..:|.|.:|....|.|..|
plant   187 ETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGAS 251

  Fly   218 GSNIDLCVITAKGAVYLRTDTI 239
            |....:..:..:|...|..|.:
plant   252 GGVASVYHVGPEGWTKLSGDDV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 64/211 (30%)
Pr_beta_C 240..274 CDD:463597 66/217 (30%)
PBE1NP_001184978.1 proteasome_beta_type_5 58..269 CDD:239730 63/210 (30%)

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