DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PAD2

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_201415.1 Gene:PAD2 / 836746 AraportID:AT5G66140 Length:250 Species:Arabidopsis thaliana


Alignment Length:196 Identity:51/196 - (26%)
Similarity:83/196 - (42%) Gaps:20/196 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSD-KNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
            :|::.|.:.||:...|.|:|..:.::|  |.:.| ::..||..|.:||....||..||..::...
plant    25 EAVRKGNAAVGVRGTDTVVLAVEKKST--PKLQDSRSARKIVSLDNHIALACAGLKADARVLINK 87

  Fly   107 TSAELDLHRLNTERRVPVVCASMMLRRTLFRY--QGHI---GAALVMGGVDTTG--PQLYCIYPC 164
            ...|...|||..|..|.|...:..:.....:|  .|.:   |.:.::.|.|...  |.||...|.
plant    88 ARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPS 152

  Fly   165 GSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVR---EAISAGVFNDLGSGSNIDLCVI 226
            |:.......|.|..:.:....||..:|.....|..|..:|   |.:.:|       |.||::.|:
plant   153 GTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVESG-------GKNIEVAVM 210

  Fly   227 T 227
            |
plant   211 T 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 49/190 (26%)
Pr_beta_C 240..274 CDD:463597
PAD2NP_201415.1 proteasome_alpha_type_7 4..210 CDD:239724 49/193 (25%)
Blue background indicates that the domain is not in the aligned region.

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