DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb11

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:193 Identity:54/193 - (27%)
Similarity:94/193 - (48%) Gaps:4/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELD 112
            ||:.:...::.|||..||||::.|..|:.....|:..:...:....:||:||..........||.
Mouse    49 GTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELR 113

  Fly   113 LHRLNTERRVPVVCASMMLRRTLFR-YQG-HIGAALVMGGVDTTGPQLYCIYPCGSNDKIPYAAM 175
            |..|. |.::|.|..:..|...:.. |:| .:..|..:.|.|.:||.|:.:|..|:..:....::
Mouse   114 LRELR-EGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSV 177

  Fly   176 GSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYL-RTD 237
            |||:..|..||:.|:..|:.:::...|.|.|::.....|..||.::||..:...|..|: |:|
Mouse   178 GSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 51/189 (27%)
Pr_beta_C 240..274 CDD:463597
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730 51/187 (27%)
Blue background indicates that the domain is not in the aligned region.

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