DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb11

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:193 Identity:54/193 - (27%)
Similarity:94/193 - (48%) Gaps:4/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELD 112
            ||:.:...::.|||..||||::.|..|:.....|:..:...:....:||:||..........||.
Mouse    49 GTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELR 113

  Fly   113 LHRLNTERRVPVVCASMMLRRTLFR-YQG-HIGAALVMGGVDTTGPQLYCIYPCGSNDKIPYAAM 175
            |..|. |.::|.|..:..|...:.. |:| .:..|..:.|.|.:||.|:.:|..|:..:....::
Mouse   114 LRELR-EGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSV 177

  Fly   176 GSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYL-RTD 237
            |||:..|..||:.|:..|:.:::...|.|.|::.....|..||.::||..:...|..|: |:|
Mouse   178 GSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 54/193 (28%)
proteasome_beta_type_7 49..236 CDD:239732 51/189 (27%)
Pr_beta_C 241..274 CDD:289249
Psmb11NP_780413.1 20S_bact_beta 48..253 CDD:163402 54/193 (28%)
proteasome_beta_type_5 50..237 CDD:239730 51/187 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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