DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psma8

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001157081.1 Gene:Psma8 / 73677 MGIID:1920927 Length:250 Species:Mus musculus


Alignment Length:218 Identity:56/218 - (25%)
Similarity:91/218 - (41%) Gaps:18/218 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|:|.|::.|||...:.|:||.:.::. ..:..::...||..|.||:....||..||..::....
Mouse    26 EAVKKGSTAVGIRGTNIVVLGVEKKSV-AKLQDERTVRKICALDDHVCMAFAGLTADARVVISRA 89

  Fly   108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIG------AALVMGGVDTTGPQLYCIYPCGS 166
            ..|...|:|..|..|.|...:..:.....:|....|      :||::|..|...|:||...|.|:
Mouse    90 RVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGT 154

  Fly   167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI----- 226
            .......|:|.........||..:..|. :...|:.::.||.|.:......|.||:|.:|     
Mouse   155 YHAWKANAIGRSAKTVREFLEKNYTEDA-ISNDKEAIKLAIKALLEVVQSGGKNIELAIIRRDQP 218

  Fly   227 ----TAKGAVYLRTDTIASEKGE 245
                :|| .:.|....|..||.|
Mouse   219 LKMFSAK-EIELEVSEIEREKDE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 49/201 (24%)
Pr_beta_C 240..274 CDD:463597 3/6 (50%)
Psma8NP_001157081.1 proteasome_alpha_type_7 5..213 CDD:239724 48/188 (26%)

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