DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psmb13a

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:264 Identity:131/264 - (49%)
Similarity:175/264 - (66%) Gaps:8/264 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GFNFINCRRNAELLSKGYE-----PPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSK 81
            ||||.|..||. :|..|.|     ||||:||||:|.|:::||||:||||||||...:|:||.|:|
Zfish    14 GFNFENATRNI-VLENGAEEGKIKPPKALKTGTTIAGVVFKDGVVLGADTRATSDEVVADKMCAK 77

  Fly    82 IHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAAL 146
            ||::..:|||||||||||||..|...|:.|.:..:|:.|...||.|..:::..||||.|.|||.|
Zfish    78 IHYIAPNIYCCGAGTAADTEKTTDMLSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYHGMIGANL 142

  Fly   147 VMGGVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGV 211
            ::||||.||..||.:.|.||.||:||.|||||.||||.:||..:|.::||||.|.||.:||.||:
Zfish   143 ILGGVDCTGSHLYTVGPYGSMDKVPYLAMGSGDLAAMGILEDRFKVNMDLEQAKALVSDAIQAGI 207

  Fly   212 FNDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKYGIKPNST--MVTSISVLSLQVTDERI 274
            ..|||||:||||||||.:|..|:|....:....:|..||..|..:|  :..:::.|.|.:..|.:
Zfish   208 MCDLGSGNNIDLCVITKEGVDYIRPHKESPYNYKRQAKYKYKSGTTPILTKTVNKLELDLVQETV 272

  Fly   275 YAVD 278
            ..::
Zfish   273 QMME 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 105/186 (56%)
Pr_beta_C 240..274 CDD:463597 8/35 (23%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 106/187 (57%)
Pr_beta_C 241..272 CDD:463597 8/30 (27%)

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