DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R1 and psmb7

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_021324576.1 Gene:psmb7 / 64278 ZFINID:ZDB-GENE-001208-4 Length:286 Species:Danio rerio


Alignment Length:273 Identity:157/273 - (57%)
Similarity:197/273 - (72%) Gaps:17/273 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GFNFINCRRN----AELLSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKI 82
            ||:|.|||||    |::...|:..|.|.||||:|.||:|||||:||||||||||.||:|||||||
Zfish    13 GFSFENCRRNALLEADITKLGFSSPAARKTGTTICGIVYKDGVVLGADTRATEGMIVADKNCSKI 77

  Fly    83 HHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALV 147
            |::..:||||||||||||||.|...|:.|:||.|:|.|...|..|:.||::.||||||:||||||
Zfish    78 HYISPNIYCCGAGTAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALV 142

  Fly   148 MGGVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVF 212
            :||||.|||.||.|||.||.||:||..||||:||||:|.|..::||::.|..|.|||:||:||:|
Zfish   143 LGGVDCTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDAIAAGIF 207

  Fly   213 NDLGSGSNIDLCVITAKGAV-YLRTDTIASEKGER---------LGKYGIKPNSTMVTS--ISVL 265
            ||||||||||:|||| ||.| |||...||::||.|         .|.|..|..:|.|.|  ::.|
Zfish   208 NDLGSGSNIDVCVIT-KGKVDYLRPHDIANKKGVREDKLDGRPVTGSYRYKHGTTGVLSKAVTPL 271

  Fly   266 SLQVTDERIYAVD 278
            :|.:.:|.:..:|
Zfish   272 NLDMVEESVQTMD 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 129/193 (67%)
proteasome_beta_type_7 49..236 CDD:239732 126/187 (67%)
Pr_beta_C 241..274 CDD:289249 12/43 (28%)
psmb7XP_021324576.1 proteasome_beta_type_7 44..232 CDD:239732 127/188 (68%)
Pr_beta_C 237..280 CDD:315191 12/42 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53608
OrthoDB 1 1.010 - - D415498at33208
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1020
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.790

Return to query results.
Submit another query.