DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PSMB3

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_002786.2 Gene:PSMB3 / 5691 HGNCID:9540 Length:205 Species:Homo sapiens


Alignment Length:198 Identity:49/198 - (24%)
Similarity:88/198 - (44%) Gaps:15/198 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTR-ATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAEL 111
            |.:::.:..|:.|.:.||.| ..:..:|: .:..||..:.|.:|...||.|.|.:.:.......|
Human     8 GGAVMAMKGKNCVAIAADRRFGIQAQMVT-TDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 71

  Fly   112 DLHRLNTERRV-PVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGSNDKI--PYA 173
            :|:.|...|:: |....||:......:..|......|:.|:|   |:.:..:.| |.|.|  |..
Human    72 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLD---PKTFKPFIC-SLDLIGCPMV 132

  Fly   174 A---MGSGTLAAM--SVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVY 233
            .   :.|||.|..  .:.|..|:|::|.:...:.:.:|:...|..|..||..:.:.:| .|..:.
Human   133 TDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHII-EKDKIT 196

  Fly   234 LRT 236
            .||
Human   197 TRT 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 49/198 (25%)
proteasome_beta_type_7 49..236 CDD:239732 46/195 (24%)
Pr_beta_C 241..274 CDD:289249
PSMB3NP_002786.2 proteasome_beta_type_3 6..201 CDD:239728 49/198 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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