DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psma8

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:190 Identity:52/190 - (27%)
Similarity:82/190 - (43%) Gaps:8/190 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|:|.|::.|||..||.|:||.:.::. ..:..::...||..|.:|:....||..||..::....
Zfish    26 EAVKKGSTAVGIRGKDIVVLGVEKKSV-AKLQEERTVRKICALDEHVCMAFAGLTADARIVINRA 89

  Fly   108 SAELDLHRLNTERRVPV-----VCASMMLRRTLFRYQGHIGAALVMGGVDTTG-PQLYCIYPCGS 166
            ..|...|||..|..|.|     ..|::..|.|....:...|.:.::.|.|..| |:||...|.|:
Zfish    90 RVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLYQTDPSGT 154

  Fly   167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
            .......|:|.........||..: .|..:......::.||.|.:......|.||:|.||
Zfish   155 YHAWKANAIGRSAKTVREFLEKNY-TDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 50/185 (27%)
proteasome_beta_type_7 49..236 CDD:239732 49/184 (27%)
Pr_beta_C 241..274 CDD:289249
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 50/188 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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