DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Prosalpha6

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster


Alignment Length:76 Identity:18/76 - (23%)
Similarity:27/76 - (35%) Gaps:24/76 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EVNQLGGVFVNGRPLPFEMRCKIVELSRQGTRPCDISRQLKISHGCVSKILTR----FSENGTIM 124
            :|:..|.||...:..|.|..|                 .||.:.|.:..::.|    :.|||.:.
  Fly    70 KVHIQGCVFFGQKEPPGECNC-----------------PLKQAWGSLDALIGRLRAAYEENGGLT 117

  Fly   125 ---PGTIGGSR 132
               |...||.|
  Fly   118 EKNPFARGGIR 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 18/76 (24%)
Pr_beta_C 240..274 CDD:463597
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 18/76 (24%)
Blue background indicates that the domain is not in the aligned region.

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