DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb2

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:163 Identity:38/163 - (23%)
Similarity:70/163 - (42%) Gaps:8/163 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHR 115
            ::||...|.|::.:|..|....:....:..|:..:.:.|.....|.|.||..........:.|::
Mouse     4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYK 68

  Fly   116 LNTERRVPVVCASMMLRRTL-----FRYQGHIGAALVMGGVDT-TGPQLYCIYPCGSNDKIPYAA 174
            :.....:....|:...||.|     .|...|:.  |::.|.|. .||.||.:....:..|.|:||
Mouse    69 MRNGYELSPTAAANFTRRNLADCLRSRTPYHVN--LLLAGYDEHEGPALYYMDYLAALAKAPFAA 131

  Fly   175 MGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAI 207
            .|.|....:|:|:..:.|.:..|:..:|:|:.:
Mouse   132 HGYGAFLTLSILDRYYTPTISRERAVELLRKCL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 38/163 (23%)
proteasome_beta_type_7 49..236 CDD:239732 38/163 (23%)
Pr_beta_C 241..274 CDD:289249
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 38/163 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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