DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psma1

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:275 Identity:64/275 - (23%)
Similarity:105/275 - (38%) Gaps:63/275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|:|.|::.||:..|...:|.|..||........|   ||.|:.:||....||..||..::....
Mouse    27 EAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQK---KILHVDNHIGISIAGLTADARLLCNFM 88

  Fly   108 SAELDLHRLNTERRVPVV-CASMMLRRTLFRYQGH----IGAALVMGGVDTTGPQLYCIYPCGSN 167
            ..|....|...:|.:||. ..|::..:|....|.:    .|..|::.|.|..||.::...|..:.
Mouse    89 RQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANY 153

  Fly   168 DKIPYAAMGSGTLAAMSVLEHGWKP----DLD--LEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
            ......::|:.:.:|.:.||.....    :||  ::.|.:.:||.:.|.  .|| :..|:.:.::
Mouse   154 FDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAE--QDL-TTKNVSIGIV 215

  Fly   227 TAKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDS 291
                                 ||                .|:.|   ||..||..|...|::...
Mouse   216 ---------------------GK----------------DLEFT---IYDDDDVSPFLDGLEERP 240

  Fly   292 Q------QADEELPE 300
            |      ||.||..|
Mouse   241 QRKAQPSQAAEEPAE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 45/197 (23%)
Pr_beta_C 240..274 CDD:463597 4/33 (12%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 48/215 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 7/24 (29%)

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