DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and pup1

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_594544.1 Gene:pup1 / 2541805 PomBaseID:SPAC23D3.07 Length:267 Species:Schizosaccharomyces pombe


Alignment Length:279 Identity:136/279 - (48%)
Similarity:176/279 - (63%) Gaps:22/279 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RSGFNFINCRRNAELLSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHH 84
            |.||:|...:||..|..||:..|||..|||:|||:|.||.::||||||||.|||::||||.|:|.
pombe     7 RKGFDFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHL 71

  Fly    85 LQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMG 149
            :..:|:|.|||||||||.:|...|:.::||.|.|.|:..||.|..||::.||||||||||.||:|
pombe    72 ISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLG 136

  Fly   150 GVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFND 214
            |.|..||.|:.|...||:||:||.|:|||:|||:||||..::|||:..:..:||:|||.||:|||
pombe   137 GYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFND 201

  Fly   215 LGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTSISVLSLQVTDERIY---A 276
            ||||||.||.||..:.|...|..:..:|:..:..||.....:|.|..          |.||   .
pombe   202 LGSGSNCDLVVIDEEKATPYRGYSKPNERATKQSKYTYDRGTTAVLK----------EDIYKFVT 256

  Fly   277 VDDQQPGTSGVQLDSQQAD 295
            |.|         ||..|.|
pombe   257 VQD---------LDEMQVD 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 109/192 (57%)
proteasome_beta_type_7 49..236 CDD:239732 107/186 (58%)
Pr_beta_C 241..274 CDD:289249 6/32 (19%)
pup1NP_594544.1 PRE1 10..237 CDD:223711 121/226 (54%)
proteasome_beta_type_7 36..224 CDD:239732 108/187 (58%)
Pr_beta_C 228..>253 CDD:289249 7/34 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 245 1.000 Domainoid score I424
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 284 1.000 Inparanoid score I652
OMA 1 1.010 - - QHG53608
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 1 1.000 - - otm46978
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1020
TreeFam 1 0.960 - -
1211.830

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