DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb9

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_036840.2 Gene:Psmb9 / 24967 RGDID:3427 Length:219 Species:Rattus norvegicus


Alignment Length:187 Identity:56/187 - (29%)
Similarity:100/187 - (53%) Gaps:2/187 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSA 109
            :.|||:|:.:.:..||::|:|:|.:.|..|.::...|:..|...|||..:|:|||.:.|....:.
  Rat    17 VHTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAY 81

  Fly   110 ELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVD-TTGPQLYCIYPCGSNDKIPYA 173
            :|:||.|..|....|:.|:.:::...::|:..:.|.|::.|.| ..|.|:|.... |...:.|:|
  Rat    82 QLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQREGGQVYGTMG-GMLIRQPFA 145

  Fly   174 AMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKG 230
            ..|||:......::..:||.:..|:.::...:||:..:..|..||..|.|..|||.|
  Rat   146 IGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADG 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 54/183 (30%)
Pr_beta_C 240..274 CDD:463597
Psmb9NP_036840.2 proteasome_beta_type_6 21..207 CDD:239731 54/183 (30%)
Blue background indicates that the domain is not in the aligned region.

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