DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb7

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_035317.1 Gene:Psmb7 / 19177 MGIID:107637 Length:277 Species:Mus musculus


Alignment Length:263 Identity:149/263 - (56%)
Similarity:198/263 - (75%) Gaps:6/263 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GFNFINCRRN----AELLSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKI 82
            ||:|.|||||    |:...||::.|||.||||:|.|::||||::||||||||||.:|:|||||||
Mouse    13 GFSFDNCRRNAVLEADFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKI 77

  Fly    83 HHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALV 147
            |.:..:||||||||||||:|.|...|:.|:||.|.|.|...||.|:.||::.||||||:||||||
Mouse    78 HFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALV 142

  Fly   148 MGGVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVF 212
            :||||.|||.||.|||.||.||:||..||||:||||:|.|..::||::.|:.|:||.|||:||:|
Mouse   143 LGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIF 207

  Fly   213 NDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTS--ISVLSLQVTDERIY 275
            ||||||||||||||:.....:||..::.::||.|||:|..:..:|.|.:  ::.|.::|.:|.:.
Mouse   208 NDLGSGSNIDLCVISKSKLDFLRPFSVPNKKGTRLGRYRCEKGTTAVLTEKVTPLEIEVLEETVQ 272

  Fly   276 AVD 278
            .:|
Mouse   273 TMD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 121/192 (63%)
proteasome_beta_type_7 49..236 CDD:239732 119/186 (64%)
Pr_beta_C 241..274 CDD:289249 11/34 (32%)
Psmb7NP_035317.1 PRE1 41..225 CDD:223711 121/183 (66%)
proteasome_beta_type_7 44..232 CDD:239732 120/187 (64%)
Pr_beta_C 236..271 CDD:289249 11/34 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S457
OMA 1 1.010 - - QHG53608
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1020
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.730

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