DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb5

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:247 Identity:65/247 - (26%)
Similarity:109/247 - (44%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FVGLRSGFNFINCRRNAELLSKG------------------YEPPKAIKTGTSIVGIIYKDGVIL 62
            |.||..|         |:||..|                  .||...:..||:.:...:..|||:
Mouse    18 FFGLGGG---------ADLLDLGPGSPGDGLSLAAPSWGVPEEPRIEMLHGTTTLAFKFLHGVIV 73

  Fly    63 GADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCA 127
            .||:|||.|..::.:...|:..:..::....||.|||........:.:..::.|..:.|:.|..|
Mouse    74 AADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAA 138

  Fly   128 SMMLRRTLFRYQGHIGAALVMG----GVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEH 188
            |.:|...:::|:   |..|.||    |.|..||.||.:...|:.......::|||::.|..|::.
Mouse   139 SKLLANMVYQYK---GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDR 200

  Fly   189 GWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIA 240
            |:..||.:|:...|.|.||....:.|..||..::|..:...|.:.:.:|.:|
Mouse   201 GYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 55/197 (28%)
proteasome_beta_type_7 49..236 CDD:239732 52/190 (27%)
Pr_beta_C 241..274 CDD:289249 65/247 (26%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 52/189 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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