DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and pbs-3

DIOPT Version :9

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_494913.1 Gene:pbs-3 / 173858 WormBaseID:WBGene00003949 Length:204 Species:Caenorhabditis elegans


Alignment Length:185 Identity:41/185 - (22%)
Similarity:79/185 - (42%) Gaps:5/185 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAEL 111
            ||.::|.:...:.|.:.:|.|..|.......:..|:|.:.|.:|...||..:|...:........
 Worm     7 TGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRK 71

  Fly   112 DLHRLNTERRVPVVCASMMLRRTLF--RYQGHIGAALVMGGVDTTGPQLYCI--YPCGSNDKIPY 172
            :|:.|...|.:.....|.|:....:  |:..:....||.|..||..|.:.|:  ..|.|..: .:
 Worm    72 NLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPR-DF 135

  Fly   173 AAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVIT 227
            .|:|:|....:.|.|:.|:.::..::..:...::|.:.:..|..||....:..||
 Worm   136 VAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTIT 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 20S_bact_beta 48..241 CDD:163402 40/184 (22%)
proteasome_beta_type_7 49..236 CDD:239732 39/183 (21%)
Pr_beta_C 241..274 CDD:289249
pbs-3NP_494913.1 PRE1 3..193 CDD:223711 41/185 (22%)
proteasome_beta_type_3 6..200 CDD:239728 41/185 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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