DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42699 and cep162

DIOPT Version :9

Sequence 1:NP_572263.2 Gene:CG42699 / 31507 FlyBaseID:FBgn0261610 Length:897 Species:Drosophila melanogaster
Sequence 2:XP_012818979.2 Gene:cep162 / 100379880 XenbaseID:XB-GENE-5961769 Length:1398 Species:Xenopus tropicalis


Alignment Length:1068 Identity:214/1068 - (20%)
Similarity:416/1068 - (38%) Gaps:311/1068 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NSSSIIEFLAKEQDCGGILNDPDPESIFQEV--SRLSDST-----DMRSVDELLQEAERLIQQQL 79
            :|.|.|:|          :|..||.::...|  .||....     |.|:..:||.     :...:
 Frog   401 SSDSEIQF----------INSRDPLTLKNSVGEERLGHQAYTIHQDERNSHDLLN-----LDHNV 450

  Fly    80 RLGGIVPKLDASGPPAPT------KTLGEEAATGGDGSSSSPQSSPHSSIRLNTRYTHRIEHSPA 138
            .....||.|..:...:||      :.|.....:.|.|.||:...:|..:::.|:        ...
 Frog   451 NTFANVPGLKLNKDKSPTSLPKRPQNLYAHVRSSGYGKSSTRLKAPALALKFNS--------GEL 507

  Fly   139 PLAPKTVAVNGRVRPRSGS----------------KSSASPTSVQTPLESSNGCGFAA------- 180
            |:..|..:.|   |...|:                |.|.:..:||...:|.....|..       
 Frog   508 PVERKDTSPN---RKHKGALSSTRILRFAGTETIPKQSRNDYTVQHKEKSVLQMDFDKTETVLQH 569

  Fly   181 -FVDNLPSASVISEES-TPKDMDMENHTAAMAKLQLQQLQDNTDDDED----TMEEITEAEVDAP 239
             ..|:..|||....:| .|:.::|.:....|. |:||.::...:.|:.    ..||..:.|.:  
 Frog   570 DMTDSFRSASGFHVDSNAPQSLNMSDAELNMF-LKLQNIEQKLNSDQTHSNILREEFLKKEEE-- 631

  Fly   240 IFSRAED--TGKEVRSPPERQFKSQGRSYIQPSQPIRPMASYSEKAVG----SSPKRMVSTLTSP 298
            ...:.||  |..||.....:|     .:||.    :..:.:..:|::.    ..||..|:  ...
 Frog   632 FLEKIEDLKTKYEVELQQHKQ-----ENYIL----LTKLHAMEDKSINKVNLGDPKDPVT--DEK 685

  Fly   299 IEQIASSVSRE----HALKLEIEQLQERLKDTE-------------------------ERLASV- 333
            |:||...:..:    |..:.|.|:|.:::|:.:                         |:|:.| 
 Frog   686 IQQIRKEIEEQEKLLHGYQQENERLYQQVKELQIRNKQNEELMFQENQSLKANLLSLREQLSKVT 750

  Fly   334 ----RLQSDS--------------LSQTQRALREHN-----SRLQEESEMLKLDVQHLNECANVL 375
                |.|.:|              |...|:  ||.|     ||.:::.:.|::|:..:.:..:.:
 Frog   751 ISHQRPQDNSEKCNSQSFTDLLVELRTVQK--REANLLDEISRQKQDKQALEVDLMQMRKERDNV 813

  Fly   376 RSELQAARRDRGEALQMQRS-----------------------------LRDELEE--------- 402
            ::.|.....|:...::|...                             |||..|:         
 Frog   814 KTLLSHTSGDKSYEMKMMEETYKQEINVLNKKLKWFAENQELLDKDANRLRDAYEQIEILKMQVE 878

  Fly   403 ------ANQERRRTGEGKEK--DSRVIQDLQRQCREMERILMRKHPDSVSALIVASKSSGMCPLN 459
                  .||..::....||:  |::.||||:||.:|||.|:.|:||:|:.|||.|:.::..|...
 Frog   879 KLKNETGNQSVQQQKRAKERAADAKRIQDLERQVKEMEGIIKRRHPNSIPALIFAAAAAPECDDK 943

  Fly   460 DQENVNSRKLLEQRIAQLESDAKEQDRKAQQILANVQARFNSVQAKYETHIADLETQVLSLQEIN 524
            |....|:...||:|:.:||:|.:.:|.::::.|..::.:|..|:.:||:.|.:|| ::|:.:.:|
 Frog   944 DSAKKNTIAFLERRVKKLETDLESKDDESKKSLRTMEQQFQKVKIQYESRIKELE-ELLTHKLMN 1007

  Fly   525 ---------TKLNEQIESQV-------RTLDRYMQKRADRYYNNCTQTEPLEEDDVSVGGGVNHG 573
                     ||. ::.|.::       :|..:.:|::.|.:..   :...||:::          
 Frog  1008 PPQKPFDNSTKA-QKFEDELLICKETRQTTIQNLQRQIDLHRK---KNLVLEKNE---------- 1058

  Fly   574 RATPVSSNTMGTQTQAANGTRDHST-NTIGCPSPALVCQQ---QHLHQAHGHLHPHAPSASSSTS 634
            |....:.:.:||:.:      :||. :.:...|..|:.::   |.|.:....|........|.  
 Frog  1059 RKKEANLSDIGTKVE------EHSNKDLLAKISQELIAKRIEIQDLTKTVERLQKERMIMLSV-- 1115

  Fly   635 STANSTPNTSRPNSKQSGGQRRSPLVTAGPSKLPISQSDSTLSLLSHGG-------GGSKEEAQL 692
                                 ::||:.|...|  .||:.:.:|.|....       .|:.:|.|.
 Frog  1116 ---------------------KNPLIKAADKK--SSQARTDISALGKRSIRDNMNFPGTLDEKQY 1157

  Fly   693 -LSSVRSMRV-DLAIKNKAM----QRLTRELDECKKTIRKLQRDKEGS-----GSGSQTGSKLDL 746
             ..:...:.: |...:|.|:    :||:.:::|.|:|.:.|....|.:     ..||:..|.|.|
 Frog  1158 HPGTFADIHISDAQAENTALKCEVERLSLKINEQKETFQTLLSQAENTIKRLKEEGSEQASALKL 1222

  Fly   747 RSQASGGAMQQRRSSGYDHHHHSDHIPA---------ATESQALKEAQNKYRLLEADYKTLHDKR 802
                    :.|:........|..||..:         :|:...:|..|.:.:.|:.|.::|...|
 Frog  1223 --------LHQKEVEKLICQHAIDHSSSKVAELSSKTSTQEILIKHLQTQVKELQKDRESLSIYR 1279

  Fly   803 LQDLKTLQSAHERELASCNETVRILQQRLNEREEALTTQKRRKVPVDYYALKAKVSLLERRHSER 867
            ::: :|||          .|..::|:: |.|.:|..:.:.:     |:.||:.|:..:|:||.:|
 Frog  1280 IRE-ETLQ----------KEVAKLLEE-LKEAKERYSPEMK-----DFLALENKIKYMEKRHLQR 1327

  Fly   868 EERLHMLVEALSKGRLNGALEDLMQENN 895
            |:.|..:::...    :.|.::.:||.:
 Frog  1328 EQELQQIIQQTH----HVAADEQIQETD 1351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42699NP_572263.2 FlaC <316..423 CDD:225888 31/201 (15%)
cep162XP_012818979.2 Smc <603..1305 CDD:224117 155/782 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49387
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.