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Protein Alignment CG3108 and Cpa5

DIOPT Version :9

Sequence 1:	NP_572262.1	Gene:	CG3108 / 31506	FlyBaseID:	FBgn0029807	Length:	1132	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	386	Identity:	134/386 - (34%)
Similarity:	225/386 - (58%)	Gaps:	29/386 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   723 YDGAQVWRIVVQTDKDKRMADELQSKYDGQLWKEVKQEVDYLLKP-------------QVLAAAE 774
            :.|.||.|::.:.:|...:..:|::        :..|:||:...|             ..|.:.:
Mouse    37 FTGDQVLRVLAKNEKQLSLLRDLET--------QKPQKVDFWRGPARPSLPVDMRVPFSELPSVK 93

  Fly   775 RHIRAANLSRIVLIDNLQRVIEKENPPAEKIAELQNRKGHRLTWQAYHRLEDIHGFIDYMAKTYP 839
            .::::..|:..::|.::|.::::|.....|...|: |..:..::.:||.|::|:.:||.....:.
Mouse    94 AYLKSHGLAYSIMIKDIQVLLDEERDAMAKSRRLE-RSTNSFSYSSYHTLDEIYSWIDNFVAEHS 157

  Fly   840 DICSTEIIGYSVEKRPLKILKISNGNARNPGIWIDGGMHAREWISPATVTYIANQLVEGW-ED-- 901
            ::.|...||.|.|.|.:.:||.|.|....|.||||.|:|:||||:.||..:|:.::|..: :|
Mouse   158 NLVSKIHIGKSFENRSILVLKFSTGGPNRPAIWIDTGIHSREWITHATGIWISQKIVNAYGKDHV 222

  Fly   902 LPEHMRSINWYIHPVANPDGYEYSHTTDRLWRKNMRAH-GRQCPGVDLNRNFGYKWGGKGTSASP 965
            |...:.:::.:|..|.||||:.::|:.:||||||..:. |..|.|||||||:...:||.|::.:|
Mouse   223 LKRILNTMDIFIEIVTNPDGFAFTHSMNRLWRKNKSSQPGIFCIGVDLNRNWKAGFGGNGSNKNP 287

  Fly   966 CSQTYRGSKAFSEPETFYISKFISGFPRETFQAYLSFHSYGQYILYPWGYDYQLTQDRADLDRVA 1030
            ||:||||....||||...|..||:|  ...|:|.:|.|||.|.::||:|:..:...:..:|..:|
Mouse   288 CSETYRGPAPESEPEVAAIVDFITG--HGNFKAMISIHSYSQMVMYPYGHSLEPVPNHEELFNLA 350

  Fly  1031 RQAGTSITKSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPA 1091
            :.|..::.|..|::|..||.:||||.|:|.|.|||.. :|||||::.|:.|||:|||:|||
Mouse   351 KDAVKALNKVHGIQYIFGSISTTLYSASGISVDWAYD-SGIKYAFSFELRDTGQYGFLLPA 410

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.