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Protein Alignment CG3108 and Cpb2

DIOPT Version :9

Sequence 1:	NP_572262.1	Gene:	CG3108 / 31506	FlyBaseID:	FBgn0029807	Length:	1132	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	420	Identity:	155/420 - (36%)
Similarity:	235/420 - (55%)	Gaps:	47/420 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   716 FNAHLRRYDGAQVWRIVVQTDKDKRMADELQSKYDGQLWK-------EVKQEVDYLLKPQVLAAA 773
            :..|...:...||...:.:|.:..::...|.:.|:..||:       |.|:||.:.:....:.:.
Mouse    15 YEQHGFAFQSGQVLSALPRTSRQVQLLQNLTTTYEVVLWQPVTAEFIEKKKEVHFFVNASDVDSV 79

  Fly   774 ERHIRAANLSRI---VLIDNLQRVIEKENPPAEKIAELQNRKGHRLTWQAYHRLEDIHGFIDYMA 835
            :.|:   |:|||   ||::|::.:||::.     ..:..:.:.....::.||.|.:|:.:|:.:.
Mouse    80 KAHL---NVSRIPFNVLMNNVEDLIEQQT-----FNDTVSPRASASYYEQYHSLNEIYSWIEVIT 136

  Fly   836 KTYPDICSTEIIGYSVEKRPLKILKISNGNAR-NPGIWIDGGMHAREWISPATVTYIANQLVE-- 897
            :.:||:.....||.|.||.||.:||:|....| ...||||.|:|||||||||...:....:.:
Mouse   137 EQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRIKNAIWIDCGIHAREWISPAFCLWFIGYVTQFH 201

  Fly   898 GWEDL-PEHMRSINWYIHPVANPDGYEYSHTTDRLWRKNMRAH-GRQCPGVDLNRNFGYK-WGGK 959
            |.|:| ...:|.:::||.||.|.|||:|:...:|:||||..|| ..:|.|.||||||..| |..|
Mouse   202 GKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAHKNNRCVGTDLNRNFASKHWCEK 266

  Fly   960 GTSASPCSQTYRGSKAFSEPETFYISKFISGFPR---ETFQAYLSFHSYGQYILYPWGYDYQLTQ 1021
            |.|:|.||:||.|....||||.    |.::.|.|   :..:||:|.|||.|.||:|:.|:...::
Mouse   267 GASSSSCSETYCGLYPESEPEV----KAVADFLRRNIDHIKAYISMHSYSQQILFPYSYNRSKSK 327

  Fly  1022 DRADLDRVARQAG---TSITKSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTG 1083
            |..:|..||.:|.   .||.|:|  :||.||.:.:||.|.||||||...: ||||::|||:.|||
Mouse   328 DHEELSLVASEAVRAIESINKNT--RYTHGSGSESLYLAPGGSDDWIYDL-GIKYSFTIELRDTG 389

  Fly  1084 RYGFVLPARFIQYNGKDGVTFADTVARAIA 1113
            ||||:||.|:|:          .|.|.|:|
Mouse   390 RYGFLLPERYIK----------PTCAEALA 409

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.