DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3108 and Cpa5

DIOPT Version :10

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:XP_063142482.1 Gene:Cpa5 / 408212 RGDID:1303098 Length:445 Species:Rattus norvegicus


Alignment Length:395 Identity:130/395 - (32%)
Similarity:216/395 - (54%) Gaps:38/395 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   723 YDGAQVWRIVVQTDKDKRMADELQ----SKYDGQLWK-------EVKQEVDYLLKPQVLAAAERH 776
            :.|.||.|::.:.:|...:..:|:    .|.|  .|:       .|...|.:...|.|.|    :
  Rat    37 FTGDQVLRVLAKNEKQLSLLRDLEIQKPQKVD--FWRGPARPSLPVDMRVPFSELPSVKA----Y 95

  Fly   777 IRAANLSRIVLIDNLQRVIEKENPPAEKIAELQNRKGHRLTWQAYHRLEDIHGFIDYMAKTYPDI 841
            :::..|:..|:|.::|.::::|.....:...|: |..:..::.:||.||:|:.:||.....:.::
  Rat    96 LKSHGLAYSVMIKDIQVLLDEERDAMARSRRLE-RSTNGFSYSSYHTLEEIYNWIDNFVAEHSNL 159

  Fly   842 CSTEIIGYSVEKRPLKILKISNGNARNPGIWIDGGMHAREWISPATVTYIANQLVEGWEDLPE-- 904
            .|...||.|.|.|.:.:||.|.|......||||.|:|:||||:.||..:|:.:  .|..::|.  
  Rat   160 VSKIHIGKSFENRSILVLKFSTGGPNRTAIWIDTGIHSREWITHATGIWISQK--HGKLEIPNSA 222

  Fly   905 HMRSI-----------NWYIHPVANPD-GYEYSHTTDRLWRKNMRAH-GRQCPGVDLNRNFGYKW 956
            |::.:           :|.:..:::.: ..:.....:||||||.... |..|.|||||||:...:
  Rat   223 HLKFVFGAEKCLGGLWSWLLQELSSENLAGKKGVVENRLWRKNKSIQPGIVCVGVDLNRNWRTGF 287

  Fly   957 GGKGTSASPCSQTYRGSKAFSEPETFYISKFISGFPRETFQAYLSFHSYGQYILYPWGYDYQLTQ 1021
            ||.|::.:|||:||||....||||...|..||:|  ...|:|.:|.|||.|.::||:|:..:...
  Rat   288 GGNGSNKNPCSETYRGPAPESEPEVAAIVAFITG--HGNFKAMISIHSYSQMVMYPYGHSLEPVP 350

  Fly  1022 DRADLDRVARQAGTSITKSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYG 1086
            :..:|..:|:.|..::.|..|::|..||.:||||.|:|.:.|||.. :|||||::.|:.|||:||
  Rat   351 NHKELFELAKDAVKALYKVHGMEYIFGSISTTLYSASGITVDWAYD-SGIKYAFSFELRDTGQYG 414

  Fly  1087 FVLPA 1091
            |:|||
  Rat   415 FLLPA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 rne <144..421 CDD:236766
PRK12323 <284..674 CDD:481241
Propep_M14 729..798 CDD:460505 15/79 (19%)
M14_CP_A-B_like 821..1105 CDD:349433 109/286 (38%)
Cpa5XP_063142482.1 None
Blue background indicates that the domain is not in the aligned region.

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