DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3108 and CG11584

DIOPT Version :9

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_572941.1 Gene:CG11584 / 32363 FlyBaseID:FBgn0030541 Length:662 Species:Drosophila melanogaster


Alignment Length:715 Identity:154/715 - (21%)
Similarity:252/715 - (35%) Gaps:121/715 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISPKRIVTIGSLLLVLGLNQVASMSLDRLALERNELPADQQQQQQQDVLVDNMKLTSIPSADSSD 79
            :.|...:.:.:|.||:...:..:..|..|.::  |:.|.|..||                     
  Fly     1 MKPFAFIVVAALSLVVVSGRPGAQYLPPLPVK--EVSAAQSFQQ--------------------- 42

  Fly    80 MYMLVPDTVASQLEDTEHVNRNSIEADPESDPSGS---SSSDMLMLESDSSPAMQLVELPSDITV 141
               ||...:...::...|....||:|   |.|..|   .||.....:|..:||...|.:|:...|
  Fly    43 ---LVQTQLQQHIQSQIHPQVESIQA---SVPLASFTIQSSGQQQYQSAPAPAPAPVSIPAPAPV 101

  Fly   142 AESQP-ETEHDTENDQQQPESIEE---HVVLMKPASQEAQLEQTVDLATEAAPVPLNDELPEDEE 202
            ..|.| ......|..|..|:.|.|   .|:..:.|::.|.|..........||.|:...:...:|
  Fly   102 VNSAPAPAPAPVEVQQPAPQVIYEAPKPVIATQTAAKNAYLPPAPVQQFVPAPEPVVANIAPQQE 166

  Fly   203 SPAATESAVEELEKESEAAMDDQVPEESEIQPEQVQPGEYQSESDGEQAETKPEIEAQPEVEAQP 267
            :...|.:|.......:.|.:...||...| |.:.:|           |..:.|  ...|.|:...
  Fly   167 TITTTYNAPAAAPVPAPAPIAIPVPAVQE-QHQVIQ-----------QTYSVP--APAPAVQQSY 217

  Fly   268 EAEAQPEAEPQLEVEPQPEVESQPEVESQPEVEAQ------PEVEPQSEVESQPEA--ESHSEPE 324
            .|.|......|....|.|.|:.|....:.|....|      |....|.:..|.|.:  :..|...
  Fly   218 SAPAPAPVVQQTYSAPAPVVQEQTYTAAAPVQAVQQLTYSAPAPVTQEQYYSAPASVVQQTSSAP 282

  Fly   325 TQAEVEAQPEVESLPEAESQPEAESQPEREPEVE----AEKISDNEVDTTEASLMETLVEGIEDG 385
            ..|....|.:..|.| |.:..:..|.|...|.|:    |...:..:..:..|..::...:.::..
  Fly   283 APAPAPVQEQFYSAP-APAIQQTYSAPAPAPVVQQTYSAPAPAPQQTYSAPAPAVQEQTQVVQSY 346

  Fly   386 LTAAMDNLVPEELAEASDKQETELESEDQQSPVTEAIEEQAVPEIEQEKEKEPEQITLADETEQD 450
            ...|     |..:|:.:......:.   ||:||.:|:.:||  .:.|:....|....:..:|...
  Fly   347 SAPA-----PAPVAQQTYSYPAPVV---QQAPVVQAVAQQA--PVVQQSYSAPAPAPVVQQTYSA 401

  Fly   451 SAQPSNEEPVEIAP-------EQHTEAEIAPAKIPEE--GKPEEEVQVEEESKPVEESKPEEEIK 506
            .| |..:|.::.||       .|.:.:..|||.:.::  ..|...||...:..||.:..|   :.
  Fly   402 PA-PVVQETIQQAPVIQQAPVVQQSYSAPAPAPVVQQSYSAPAPVVQETIQQAPVIQQAP---VV 462

  Fly   507 QQEDAKPEEDDQNYAETQPAVTEV----KPEETPADIPVEIPAEVPAEIPAEIPAEVPAEIPAES 567
            ||..:.|....|...:..|.:.:.    :....||..||     |.....|..||.|..|...::
  Fly   463 QQSYSAPAPVVQETIQQAPVIQQAPVVQQSYSAPAPAPV-----VQQSYSAPAPAPVVQESIQQA 522

  Fly   568 PA---EIAAEVPAEIPAEIPA------------EIPAETPAETHAEIPADVPAQVVAEAPAETPA 617
            |.   ...|..|..||..:..            :.|.:.||.....:||  ||.||..|||..||
  Fly   523 PVIQQSYTAPAPVSIPEPVQQIVQQPQYSGYSYQTPQQAPAPIQQSLPA--PAPVVISAPAPAPA 585

  Fly   618 ETPAE-----VPA-EIPSKVQDEIQSDSTQAEPQVEKEAQQPEKETKPLESSLLTTIIPMVMPQP 676
            ..|.:     ||| ..|.::|...|.....:.|.|:::....:....|::   :....|:.:..|
  Fly   586 PAPVQLQQSFVPAPPAPIQIQQPAQPIVQYSPPVVQQQVTYTQPAPAPIQ---VAAAAPVAVSAP 647

  Fly   677  676
              Fly   648  647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 Propep_M14 730..797 CDD:280416
M14_CP_A-B_like 821..1112 CDD:199844
CG11584NP_572941.1 rne <209..408 CDD:236766 42/210 (20%)
rne <329..539 CDD:236766 48/228 (21%)
TFIIA 475..>635 CDD:281188 40/166 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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