DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3108 and Agtpbp1

DIOPT Version :9

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001099570.1 Gene:Agtpbp1 / 290986 RGDID:1306307 Length:1219 Species:Rattus norvegicus


Alignment Length:913 Identity:164/913 - (17%)
Similarity:279/913 - (30%) Gaps:342/913 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 GLTAAMDNLVPE---ELAEASDKQETELESEDQQSPVTEAIEEQAVPEIEQEKEKEPEQITLADE 446
            |..|.:.||.||   .:.|:.|..:.:||:|:                 |.|.|.:.:|....|:
  Rat   351 GPVAQLYNLPPEVDDVVDESDDNDDIDLEAEN-----------------EVENEDDLDQSFKNDD 398

  Fly   447 TEQDSAQPSNEEPVEIAPEQHTEAEIAPAKIPEEGKPEEEVQVEEESKPVEESKPEEEIKQQEDA 511
            .|.|.                  .::.|.::|                    .:..||:|..|..
  Rat   399 IETDI------------------NKLRPQQVP--------------------GRTIEELKMYEHL 425

  Fly   512 KPE--EDDQNY----AETQPAVTEVKPEETPADIPVEIPA---EVPAEIPAEIPAEVPAEIPAES 567
            .||  :|.|:|    .|.:|.|.|.|...     |:.:|.   |||.. |..:......:..|..
  Rat   426 FPELVDDFQDYELIAKEPKPFVFEGKVRG-----PIVVPTAGEEVPGN-PGNVRKGAAVKEKASP 484

  Fly   568 PAEIAAEVPAEIPAEIPAEIPAETPAETHAEIPADVPAQVVAEAPAETPAETPAEVPAEIPSKVQ 632
            ..|...|.........|.::..:..|...|....:   .:|......|...||::|.|.:.:.::
  Rat   485 KGEEVKEDAKGHDKTPPWQLGGQNRAAASAHSSNN---DLVKALDRITLQSTPSQVAAGLTAGMR 546

  Fly   633 DE-----IQSDSTQAEPQVEK-----------------------------EAQQPEKETKPLESS 663
            .:     .....|:|.|.|.|                             |:....::...:|:|
  Rat   547 KDYGLPLTVLSCTKACPHVAKCTSALFEGRTVHLGKLCCTGVETEDDEDFESHSSAEQVSSVEAS 611

  Fly   664 LLTTIIPMVMPQPQVPSQPLQVQDSVLNYVNASFMQQQPSETDL-----PKTEE---ESPFNAHL 720
                ..|..:..|.:..:.::...||..|...::       .|.     |..:|   |.|:.  :
  Rat   612 ----DGPPTLHDPDLYIEIVKNTKSVPEYSEVAY-------PDYFGHIPPPFKEPILERPYG--V 663

  Fly   721 RRYDGAQ-VWRIVVQTDKDKRMADEL----------------QSKYD-GQLWKEV---KQEVDYL 764
            :|...|| :.|::.|.|...|:..:|                .||:: |.|.|.:   |.|.|.:
  Rat   664 QRTKIAQDIERLIHQNDIIDRVVYDLDNPNYTTPEEGDILKFNSKFESGNLRKVIQIRKSEYDLI 728

  Fly   765 LKPQVLAAAERH-----------IRAANLSRIVLIDNLQRVIEKEN--------PPAEKIAELQN 810
            |...:   ...|           :|.....|..:|:     .||.|        |....:.|..|
  Rat   729 LNSDI---NSNHYHQWFYFEVSGMRPGVAYRFNIIN-----CEKSNSQFNYGMQPLMYSVQEALN 785

  Fly   811 ------RKGHRLTW-----------------QAYHRLEDIHGF-----IDYMAKTYPDICSTEII 847
                  |.|..:.:                 ::|:.:.....|     :.|.|..||...||  :
  Rat   786 ARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTITFTVVFPHKDDVCYFAYHYPYTYST--L 848

  Fly   848 GYSVEK-----RPLKI-------LKISNGNA----------------------RNPGIWIDGGMH 878
            ...::|     .|.:|       .:..:||:                      ..|.|::...:|
  Rat   849 QMHLQKLESAHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESSYYEHICQFRTRPYIFLSARVH 913

  Fly   879 ARE----WISPATVTYI------ANQLVEGWEDLPEHMRSINWYIHPVANPDGYEYSHTTDRLWR 933
            ..|    |:...|:.|:      |..|.|.:          .:.|.|:.||||....:       
  Rat   914 PGETNASWVMKGTLEYLMSNSPTAQSLREAY----------IFKIVPMLNPDGVINGN------- 961

  Fly   934 KNMRAHGRQCPGVDLNRNFGYKWGGKGTSASPCSQTYRGSKAFSEPETFYISK----FISGFPRE 994
                 |.....|.||||    :|........|               |.|.:|    :::...|.
  Rat   962 -----HRCSLSGEDLNR----QWQSPNPELHP---------------TIYHAKGLLQYLAAVKRL 1002

  Fly   995 TFQAYLSFHSYGQ---YILY-------PWGYDYQLTQDRADLDRVARQAGTSITKSTGVKYTVGS 1049
            .. .|..:|.:.:   ..:|       .|.     |.|.|        |...:.:..|.: |:..
  Rat  1003 PL-VYCDYHGHSRKKNVFMYGCSIKETVWH-----THDNA--------ASCDVVEDMGYR-TLPK 1052

  Fly  1050 SATTLYPA----------AGGSDDWAKGIA----GIKYAYTIEMG----DTGRY-GFVLPARFIQ 1095
            ..:.:.||          ....:..|:.:.    |::.:||:|..    |.||| |..:..|.::
  Rat  1053 ILSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGRYKGLQIGTRELE 1117

  Fly  1096 YNG 1098
            ..|
  Rat  1118 EMG 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 Propep_M14 730..797 CDD:280416 18/97 (19%)
M14_CP_A-B_like 821..1112 CDD:199844 65/360 (18%)
Agtpbp1NP_001099570.1 Pepdidase_M14_N 705..839 CDD:407865 24/141 (17%)
M14_Nna1 862..1132 CDD:349477 55/315 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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