DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3108 and Agtpbp1

DIOPT Version :10

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001099570.1 Gene:Agtpbp1 / 290986 RGDID:1306307 Length:1219 Species:Rattus norvegicus


Alignment Length:911 Identity:164/911 - (18%)
Similarity:279/911 - (30%) Gaps:338/911 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 GLTAAMDNLVPE---ELAEASDKQETELESEDQQSPVTEAIEEQAVPEIEQEKEKEPEQITLADE 446
            |..|.:.||.||   .:.|:.|..:.:||:|:                 |.|.|.:.:|....|:
  Rat   351 GPVAQLYNLPPEVDDVVDESDDNDDIDLEAEN-----------------EVENEDDLDQSFKNDD 398

  Fly   447 TEQDSAQPSNEEPVEIAPEQHTEAEIAPAKIPEEGKPEEEVQVEEESKPVEESKPEEEIKQQEDA 511
            .|.|.                  .::.|.::|                    .:..||:|..|..
  Rat   399 IETDI------------------NKLRPQQVP--------------------GRTIEELKMYEHL 425

  Fly   512 KPE--EDDQNY----AETQPAVTEVKPEETPADIPVEIPA---EVPAEIPAEIPAEVPAEIPAES 567
            .||  :|.|:|    .|.:|.|.|.|...     |:.:|.   |||.. |..:......:..|..
  Rat   426 FPELVDDFQDYELIAKEPKPFVFEGKVRG-----PIVVPTAGEEVPGN-PGNVRKGAAVKEKASP 484

  Fly   568 PAEIAAEVPAEIPAEIPAEIPAETPAETHAEIPADVPAQVVAEAPAETPAETPAEVPAEIPSKVQ 632
            ..|...|.........|.::..:..|...|....:   .:|......|...||::|.|.:.:.::
  Rat   485 KGEEVKEDAKGHDKTPPWQLGGQNRAAASAHSSNN---DLVKALDRITLQSTPSQVAAGLTAGMR 546

  Fly   633 DE-----IQSDSTQAEPQVEK-----------------------------EAQQPEKETKPLESS 663
            .:     .....|:|.|.|.|                             |:....::...:|:|
  Rat   547 KDYGLPLTVLSCTKACPHVAKCTSALFEGRTVHLGKLCCTGVETEDDEDFESHSSAEQVSSVEAS 611

  Fly   664 LLTTIIPMVMPQPQVPSQPLQVQDSVLNYVNAS---FMQQQPSETDLPKTEE---ESPFNAHLRR 722
                ..|..:..|.:..:.::...||..|...:   :....|     |..:|   |.|:.  ::|
  Rat   612 ----DGPPTLHDPDLYIEIVKNTKSVPEYSEVAYPDYFGHIP-----PPFKEPILERPYG--VQR 665

  Fly   723 YDGAQ-VWRIVVQTDKDKRMADEL----------------QSKYD-GQLWKEV---KQEVDYLLK 766
            ...|| :.|::.|.|...|:..:|                .||:: |.|.|.:   |.|.|.:|.
  Rat   666 TKIAQDIERLIHQNDIIDRVVYDLDNPNYTTPEEGDILKFNSKFESGNLRKVIQIRKSEYDLILN 730

  Fly   767 PQVLAAAERH-----------IRAANLSRIVLIDNLQRVIEKEN--------PPAEKIAELQN-- 810
            ..:   ...|           :|.....|..:|:     .||.|        |....:.|..|  
  Rat   731 SDI---NSNHYHQWFYFEVSGMRPGVAYRFNIIN-----CEKSNSQFNYGMQPLMYSVQEALNAR 787

  Fly   811 ----RKGHRLTW-----------------QAYHRLEDIHGF-----IDYMAKTYPDICSTEIIGY 849
                |.|..:.:                 ::|:.:.....|     :.|.|..||...||  :..
  Rat   788 PWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTITFTVVFPHKDDVCYFAYHYPYTYST--LQM 850

  Fly   850 SVEK-----RPLKI-------LKISNGNA----------------------RNPGIWIDGGMHAR 880
            .::|     .|.:|       .:..:||:                      ..|.|::...:|..
  Rat   851 HLQKLESAHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESSYYEHICQFRTRPYIFLSARVHPG 915

  Fly   881 E----WISPATVTYI------ANQLVEGWEDLPEHMRSINWYIHPVANPDGYEYSHTTDRLWRKN 935
            |    |:...|:.|:      |..|.|.:          .:.|.|:.||||....:         
  Rat   916 ETNASWVMKGTLEYLMSNSPTAQSLREAY----------IFKIVPMLNPDGVINGN--------- 961

  Fly   936 MRAHGRQCPGVDLNRNFGYKWGGKGTSASPCSQTYRGSKAFSEPETFYISK----FISGFPRETF 996
               |.....|.||||    :|........|               |.|.:|    :::...|...
  Rat   962 ---HRCSLSGEDLNR----QWQSPNPELHP---------------TIYHAKGLLQYLAAVKRLPL 1004

  Fly   997 QAYLSFHSYGQ---YILY-------PWGYDYQLTQDRADLDRVARQAGTSITKSTGVKYTVGSSA 1051
             .|..:|.:.:   ..:|       .|.     |.|.|        |...:.:..|.: |:....
  Rat  1005 -VYCDYHGHSRKKNVFMYGCSIKETVWH-----THDNA--------ASCDVVEDMGYR-TLPKIL 1054

  Fly  1052 TTLYPA----------AGGSDDWAKGIA----GIKYAYTIEMG----DTGRY-GFVLPARFIQYN 1097
            :.:.||          ....:..|:.:.    |::.:||:|..    |.||| |..:..|.::..
  Rat  1055 SHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGRYKGLQIGTRELEEM 1119

  Fly  1098 G 1098
            |
  Rat  1120 G 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 rne <144..421 CDD:236766 11/38 (29%)
PRK12323 <284..674 CDD:481241 61/334 (18%)
Propep_M14 729..798 CDD:460505 19/99 (19%)
M14_CP_A-B_like 821..1105 CDD:349433 65/360 (18%)
Agtpbp1NP_001099570.1 Pepdidase_M14_N 705..839 CDD:407865 24/141 (17%)
M14_Nna1 862..1132 CDD:349477 55/315 (17%)

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