DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3108 and sftb-1

DIOPT Version :9

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_497853.1 Gene:sftb-1 / 175549 WormBaseID:WBGene00011605 Length:1322 Species:Caenorhabditis elegans


Alignment Length:828 Identity:152/828 - (18%)
Similarity:263/828 - (31%) Gaps:281/828 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EPQPEVESQPEVESQPEVEAQP-----EVEPQSEVESQPEAESHSEPETQAEVEAQPEVESLPEA 341
            |...:.:|.|.|:.:....|||     ||...|| ::.|.|::    .|:...|.|.:..     
 Worm    71 EDDVDEDSMPSVQKKSTNYAQPHKFIEEVAAASE-DTDPFADT----RTKTIAERQSKYH----- 125

  Fly   342 ESQPEAESQPEREPEVEAEKISDNEVDTTEASLMETLVEGIEDGLTAAMDNLVPEELAEASDKQE 406
            |.....:..|:|         :|..||.|..:......|.:.|.:.......|..|||:.:...|
 Worm   126 ERAMRRQISPDR---------ADAFVDQTPDNRNRGYAEVMRDQMYHEEKGRVERELADRAKAGE 181

  Fly   407 TELESE--------DQQSPVTEAIEE-----QAVPEIEQEKEKEPEQITLADETEQDSAQPS--- 455
            ..:..:        |.::|.|:|..:     .|.|    .:...|.:.....:...|:|.|.   
 Worm   182 LHVTGQPEKKKGRWDAEAPSTDASSDNLGAASATP----SQGSAPRKRLGFSKISADAATPRAAR 242

  Fly   456 -NEEP------VEIAPEQHTEAEIAPAKIPEEGKPEEEVQVEEESKPVEESKPEEEIK------- 506
             :|.|      .:..|.....:....|:.|...:.:|              .|:|.:.       
 Worm   243 WDETPAHSTGAADATPSVDKWSTTPAAQTPRRNRWDE--------------TPKENLNDGSMTPG 293

  Fly   507 --QQEDAKPEEDDQNYAETQPAVTEVKPEETPA--------DIPVEIPAEVPAEIPAEIPAEVPA 561
              .:..|:...||            ||.|:||:        |:               .|::.| 
 Worm   294 WGMETPARGGSDD------------VKIEDTPSASKRRSRWDL---------------TPSQTP- 330

  Fly   562 EIPAESPAEIAAEVPAEIPAEIPAEIPAETPAETHAEIPADVPAQVVAEAPAETPAETPAEVPAE 626
            .:.|.:|.....:.|:..|:.     |::||      |.|..|........|....:|||  |..
 Worm   331 NVAAATPLHSGLQTPSFTPSH-----PSQTP------IGAMTPGGATPIGTAAMGMKTPA--PHM 382

  Fly   627 IPSKVQDEIQSDSTQAEPQVEKEAQQPEKETKPLESSLLTTIIP--------------------- 670
            ||          .|..:.|:.:..::.:...:||....|.::.|                     
 Worm   383 IP----------MTPEQMQIYRWEKEIDDRNRPLTDEELDSLFPPGYKVLVPPMNYIPLRTPSRK 437

  Fly   671 -MVMPQPQ---------VPSQPLQVQDSVLNYVNASFMQQQPSETDLP--KTEEESPFNAHLRRY 723
             |..|.|.         :|..|  .:|.:........:..||...:||  |.::...|:..|...
 Worm   438 LMATPTPMGGAAGGGFFMPGTP--DRDGIGEKGVGGLVDTQPKNAELPPLKPDDMQYFDKLLMDV 500

  Fly   724 DGAQVWRIVVQTDKDK------------------------RMADELQSKYD-GQLWKEVKQEVDY 763
            |.:|:      |.::|                        |...|...||. |.|:.::   :..
 Worm   501 DESQL------TKEEKNEREIMEHLLKIKNGTPPMRKSGLRKITENARKYGAGPLFNQI---LPL 556

  Fly   764 LLKPQVLAAAERHIRAANLSRIVL-IDNLQR--------VIEKENPPAEKIAELQNRKGHRLTWQ 819
            |:.|. |...|||:....:.||:. :|:|.|        |||......:..|.::.|       :
 Worm   557 LMSPS-LEDQERHLMVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGR-------E 613

  Fly   820 AYHRLEDIHGFIDYMAKTYPDICSTEIIGYSVEKRPLKILKISNG------------------NA 866
            ....|....|....::...|||.:.:....:...|...::..:.|                  .|
 Worm   614 IISNLAKAAGLATMISTMRPDIDNVDEYVRNTTARAFAVVASALGIPALLPFLKAVCKSKKSWQA 678

  Fly   867 RNPGIWIDGGM----------HAREWISPATVTYIANQLVE-GWEDLPEHMRSINWY----IHPV 916
            |:.||.|...|          |.:..:          .:|| |.:|..:.:|:|...    :...
 Worm   679 RHTGIKIVQQMAILMGCAVLPHLKALV----------DIVESGLDDEQQKVRTITALCLAALAEA 733

  Fly   917 ANPDGYE-YSHTTDRLWRKNMRAHGRQCPGVDLNRNFGYKWGGKGTSA 963
            ::|.|.| :......||:           |:.::|       |||.:|
 Worm   734 SSPYGIEAFDSVLKPLWK-----------GIRMHR-------GKGLAA 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 Propep_M14 730..797 CDD:280416 21/100 (21%)
M14_CP_A-B_like 821..1112 CDD:199844 31/177 (18%)
sftb-1NP_497853.1 DUF5585 185..477 CDD:375359 58/362 (16%)
SF3b1 316..444 CDD:370189 28/166 (17%)
HSH155 480..1319 CDD:227508 62/329 (19%)
HEAT repeat 624..652 CDD:293787 4/27 (15%)
HEAT repeat 662..691 CDD:293787 6/28 (21%)
HEAT repeat 868..892 CDD:293787
HEAT repeat 906..937 CDD:293787
HEAT repeat 949..979 CDD:293787
HEAT repeat 991..1017 CDD:293787
HEAT repeat 1031..1060 CDD:293787
HEAT repeat 1072..1105 CDD:293787
HEAT repeat 1114..1136 CDD:293787
HEAT repeat 1145..1172 CDD:293787
HEAT repeat 1186..1212 CDD:293787
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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