DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3108 and T06A4.3

DIOPT Version :9

Sequence 1:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001021611.1 Gene:T06A4.3 / 171668 WormBaseID:WBGene00020283 Length:505 Species:Caenorhabditis elegans


Alignment Length:466 Identity:142/466 - (30%)
Similarity:216/466 - (46%) Gaps:80/466 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 LPKTEEESPFNAHLRRYDGA-----QVWRIVVQTDKDKR-----MADELQSKYDGQLWKEVKQEV 761
            |||::.:  |.|..|.|..|     ..|:    |.|||.     |.|...|||          .:
 Worm    29 LPKSQTD--FQAIQRLYKNATDHDLNFWK----TGKDKHGFWDVMVDMKNSKY----------FL 77

  Fly   762 DYLLKPQVLAAAERHIRAANLSRIVLIDNLQRVIEKENPPAEKIAELQN---------RKGHR-- 815
            |:|             :..::|.|..||:::.:|.|.    |....|.|         ...|.  
 Worm    78 DFL-------------QVNDISYIKTIDDVEGLITKH----ENNKTLSNMFPRLWDDSSSAHYDF 125

  Fly   816 LTWQAYHRLEDIHGFIDYMAKTYPDICSTEIIGYSVEKRPLKILKISNGNARNPGI-WIDGGMHA 879
            .|:.:|.|:.|   ::..:...||.:.....||.:.|.|.:..::| .|::|...| |||||:||
 Worm   126 HTYGSYQRMTD---WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEI-GGDSRTKKIFWIDGGIHA 186

  Fly   880 REWISPATVTYIANQLVEGWED--LPEHMRSINWYIHPVANPDGYEYSHTTD----RLWRKN--- 935
            |||.:|.|..:..:||.....:  :.:.:..|.:.:.|..||||||::.::.    ||||||   
 Worm   187 REWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFTRSSTNPHVRLWRKNRSK 251

  Fly   936 ------MRAHGRQCPGVDLNRNFGYKWGGKGTSASPCSQTYRGSKAFSEPETFYI-SKFISGFPR 993
                  :....|.|.||||||||.:.:...|||..|||:.|:|...|||||...: ...:|...:
 Worm   252 MQCRKDIWGRNRCCRGVDLNRNFDFHFRESGTSDDPCSEIYQGPSPFSEPEAKAVRDALLSQRYK 316

  Fly   994 ETFQAYLSFHSYGQYILYPWGYDYQ-LTQDRADLDRVARQAGTSITKSTGVKYTVGSSATTLYPA 1057
            ....||::.|:|.|..::|:|:... ...|..||..|.::|..::.:..|.||.|||.|.|||||
 Worm   317 GRTDAYITLHTYSQIWIHPYGHKKDAYPGDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPA 381

  Fly  1058 AGGSDDWAKGIAGIKYAYTIEM--GDTGRYGFVLPARFIQYNGKDGVTFADTVARAIAQG--RGK 1118
            :|||:||||..|.:|:.|.:|:  .:....||:|..:.:....::.......||.|:...  .||
 Worm   382 SGGSEDWAKHEAKVKFVYLLELRPDEKNWDGFILDEKELIPTARETWEGVRVVAEAVLDRIVAGK 446

  Fly  1119 SVARNSSGSRR 1129
            |.|...:...|
 Worm   447 STAPREAPKAR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3108NP_572262.1 Propep_M14 730..797 CDD:280416 16/71 (23%)
M14_CP_A-B_like 821..1112 CDD:199844 105/310 (34%)
T06A4.3NP_001021611.1 Propep_M14 31..98 CDD:366995 22/95 (23%)
M14_CP_A-B_like 128..438 CDD:349433 105/313 (34%)
ShK 468..505 CDD:366702
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 1 1.000 - - mtm8411
orthoMCL 1 0.900 - - OOG6_100142
Panther 1 1.100 - - O PTHR11705
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X86
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.