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Protein Alignment CG42264 and Cpa5

DIOPT Version :9

Sequence 1:	NP_572260.2	Gene:	CG42264 / 31504	FlyBaseID:	FBgn0259149	Length:	634	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	459	Identity:	126/459 - (27%)
Similarity:	212/459 - (46%)	Gaps:	61/459 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   188 LSPMDLRRF---DFISPGSSYQINRRYRNGSQVQRYYG---FQLWKVHETRLEQPELRAFWRHFG 246
            |||:|.|..   :||...:..|:|   ..|.||.|...   .||..:.:...::|:...|||
Mouse    13 LSPLDRRTLLFCNFILAVAWGQVN---FTGDQVLRVLAKNEKQLSLLRDLETQKPQKVDFWR--- 71

  Fly   247 SEVWNINQDG-------IDILIEQRNVADARKFMDKVGYSYNIMIDDIESAIDESYVEVPAVEHP 304
                     |       :|:.:....:...:.::...|.:|:|||.||:..:||.. :..|....
Mouse    72 ---------GPARPSLPVDMRVPFSELPSVKAYLKSHGLAYSIMIKDIQVLLDEER-DAMAKSRR 126

  Fly   305 LDSVRNNSLPWMEVPGSTMNWRRYHDQADIKQFLQTLLETYSENVELIQIGVTRNKRPLEVIRVS 369
            |:...|           :.::..||...:|..::...:..:|..|..|.||.:...|.:.|::.|
Mouse   127 LERSTN-----------SFSYSSYHTLDEIYSWIDNFVAEHSNLVSKIHIGKSFENRSILVLKFS 180

  Fly   370 NGNPDNWAVFVDAGLQARDWLSPAALTYAISKLTHLWGRPKGKDKGEGQRQSRAEKAMRRI---- 430
            .|.|:..|:::|.|:.:|:|::.|...:...|:.:.:|:               :..::||
Mouse   181 TGGPNRPAIWIDTGIHSREWITHATGIWISQKIVNAYGK---------------DHVLKRILNTM 230

  Fly   431 DWYFLPLANPDGYQYSRQTDRLWTKNRGYDSVSGCYGVNLDRNFDYGWDGTGSTSNPCKNLYRGA 495
            |.:...:.||||:.::...:|||.||:.......|.||:|:||:..|:.|.||..|||...|||.
Mouse   231 DIFIEIVTNPDGFAFTHSMNRLWRKNKSSQPGIFCIGVDLNRNWKAGFGGNGSNKNPCSETYRGP 295

  Fly   496 HSFSEPESRAVCSFLSGMREYLGAYVSLGGYGQAITYPWGDADYVTENQRNLKQTARRAVLALRR 560
            ...||||..|:..|::|...: .|.:|:..|.|.:.||:|.:.....|...|...|:.||.||.:
Mouse   296 APESEPEVAAIVDFITGHGNF-KAMISIHSYSQMVMYPYGHSLEPVPNHEELFNLAKDAVKALNK 359

  Fly   561 LNQAEYSSGTSYRQKLARPGNSADWVQDRIGPQLVFNMFLKDQGRYGYLLPPHYIVESGEEVFEF 625
            ::..:|..|:......:..|.|.||..|. |.:..|:..|:|.|:||:|||...||.:.||.:..
Mouse   360 VHGIQYIFGSISTTLYSASGISVDWAYDS-GIKYAFSFELRDTGQYGFLLPASQIVPTAEETWMA 423

  Fly   626 LRII 629
            |:.|
Mouse   424 LQTI 427

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.