DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42264 and Cpa4

DIOPT Version :9

Sequence 1:NP_572260.2 Gene:CG42264 / 31504 FlyBaseID:FBgn0259149 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_017177239.1 Gene:Cpa4 / 71791 MGIID:1919041 Length:469 Species:Mus musculus


Alignment Length:515 Identity:135/515 - (26%)
Similarity:233/515 - (45%) Gaps:68/515 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LTFVALIGS-VFGQKLLLWRSVSVPEISGISGLPLALLTLNSSELYESTLEGLQWLSPMDLRRFD 197
            |.|.||||: :.|:..........|..:.....|..|:.  ||.:::....||  |:...|....
Mouse     5 LFFGALIGAGICGRDKFFGSFSPHPSPAAPPTRPFPLIL--SSSVWDGGFGGL--LASRKLTIIF 65

  Fly   198 FISPGSSYQINR-RYRNGSQVQR--------YYGFQLWKVHETRLEQPELRAFWRHFGSEVWNIN 253
            |..|.|..|:.| ..|||.::::        :....:||...| .::|                 
Mouse    66 FSLPFSRDQVFRINVRNGDEIRKLTELVNSDHLKLSVWKSPST-FDRP----------------- 112

  Fly   254 QDGIDILIEQRNVADARKFMDKVGYSYNIMIDDIESAIDESYVEVPAVEHPLDSVRNNSLPWMEV 318
               :|||:...::...:.|:...|..|::.|:|:::.:|.   |...::|      |..:   |.
Mouse   113 ---VDILVPSVSLLPVKSFLKSQGLDYSVTIEDLQALLDN---EDEEMQH------NEGI---ER 162

  Fly   319 PGSTMNWRRYHDQADIKQFLQTLLETYSENVELIQIGVTRNKRPLEVIRVSNG----NPDNWAVF 379
            .|. .|:..||....|...:.::...:.|.|..::||.|..|||:.|::.|.|    .|   |::
Mouse   163 SGD-FNYGAYHPLEAIYHEMDSIATDFPELVSRVKIGETFEKRPMYVLKFSTGGGKKRP---AIW 223

  Fly   380 VDAGLQARDWLSPAALTYAISKLTHLWGRPKGKDKGEGQRQSRAEKAMRRIDWYFLPLANPDGYQ 444
            ::||:.||:|:|.|...:...|:.           .:.::.......::::|.:.||:||||||.
Mouse   224 LNAGIHAREWISQATAIWTARKIV-----------TDYKKDPAITSILKKVDIFLLPVANPDGYV 277

  Fly   445 YSRQTDRLWTKNRGYDSVSGCYGVNLDRNFDYGWDGTGSTSNPCKNLYRGAHSFSEPESRAVCSF 509
            |::..:|||.|.|..:..|.|.|.:.:||::..:.|.|::.|||..:|.|:|..||.|.::|..|
Mouse   278 YTQSQNRLWRKTRSRNPGSRCVGADPNRNWNASFAGEGTSDNPCSEVYHGSHPNSEVEVKSVVDF 342

  Fly   510 LSGMREYLGAYVSLGGYGQAITYPWGDADYVTENQRNLKQTARRAVLALRRLNQAEYSSGTSYRQ 574
            :.....: ..::.|..|.|.:.||:|.......:...|...||.|..||..|:..:|..|.:...
Mouse   343 IQKHGNF-KCFIDLHSYSQLLMYPYGYTVKKAPDAEELDDVARNAAQALASLSGTKYRVGPTCTT 406

  Fly   575 KLARPGNSADWVQDRIGPQLVFNMFLKDQGRYGYLLPPHYIVESGEEVFEFLRIIAQQLQ 634
            .....|:|.||..|. |.:..|...|:|.|.||:|||...|:.:.||.:..|:.|.:.::
Mouse   407 VYPASGSSVDWAYDN-GIKYAFTFELRDTGYYGFLLPASQIIPTAEETWLGLKTIMEHVR 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42264NP_572260.2 Propep_M14 <241..293 CDD:280416 8/51 (16%)
M14_CP_A-B_like 328..633 CDD:199844 92/308 (30%)
Cpa4XP_017177239.1 Propep_M14 81..150 CDD:366995 16/92 (17%)
M14_CPA 166..467 CDD:349442 93/316 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848039
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.