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Protein Alignment CG42264 and Cpb2

DIOPT Version :9

Sequence 1:	NP_572260.2	Gene:	CG42264 / 31504	FlyBaseID:	FBgn0259149	Length:	634	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	408	Identity:	114/408 - (27%)
Similarity:	195/408 - (47%)	Gaps:	44/408 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   212 RNGSQVQRYYGFQLWKVHETRLEQPELRAFWRHFGSEVWNINQDGIDILIEQRNVADARKFMDKV 276
            |...|||...  .|...:|..|.||....|........:.:|...:|.:....||:
Mouse    33 RTSRQVQLLQ--NLTTTYEVVLWQPVTAEFIEKKKEVHFFVNASDVDSVKAHLNVS--------- 86

  Fly   277 GYSYNIMIDDIESAIDESYVEVPAVEHPLDSVRNNSLPWMEVPGSTMNWRRYHDQADIKQFLQTL 341
            ...:|::::::|..|::....        |:|...:        |...:.:||...:|..:::.:
Mouse    87 RIPFNVLMNNVEDLIEQQTFN--------DTVSPRA--------SASYYEQYHSLNEIYSWIEVI 135

  Fly   342 LETYSENVELIQIGVTRNKRPLEVIRVSNGNP--DNWAVFVDAGLQARDWLSPAALTYAISKLTH 404
            .|.:.:.::.|.||.:..|.||.|::||....  .| |:::|.|:.||:|:|||...:.|..:|.
Mouse   136 TEQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRIKN-AIWIDCGIHAREWISPAFCLWFIGYVTQ 199

  Fly   405 LWGRPKGKDKGEGQRQSRAEKAMRRIDWYFLPLANPDGYQYSRQTDRLWTKNRGYDSVSGCYGVN 469
            ..|           :::...:.:|.:|:|.:|:.|.|||.|:.:.:|:|.|||.....:.|.|.:
Mouse   200 FHG-----------KENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAHKNNRCVGTD 253

  Fly   470 LDRNF-DYGWDGTGSTSNPCKNLYRGAHSFSEPESRAVCSFLSGMREYLGAYVSLGGYGQAITYP 533
            |:||| ...|...|::|:.|...|.|.:..||||.:||..||....:::.||:|:..|.|.|.:|
Mouse   254 LNRNFASKHWCEKGASSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIKAYISMHSYSQQILFP 318

  Fly   534 WGDADYVTENQRNLKQTARRAVLALRRLNQ-AEYSSGTSYRQKLARPGNSADWVQDRIGPQLVFN 597
            :......:::...|...|..||.|:..:|: ..|:.|:........||.|.||:.| :|.:..|.
Mouse   319 YSYNRSKSKDHEELSLVASEAVRAIESINKNTRYTHGSGSESLYLAPGGSDDWIYD-LGIKYSFT 382

  Fly   598 MFLKDQGRYGYLLPPHYI 615
            :.|:|.||||:|||..||
Mouse   383 IELRDTGRYGFLLPERYI 400

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.