DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42264 and agbl5

DIOPT Version :9

Sequence 1:NP_572260.2 Gene:CG42264 / 31504 FlyBaseID:FBgn0259149 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_017210489.1 Gene:agbl5 / 445479 ZFINID:ZDB-GENE-040822-29 Length:886 Species:Danio rerio


Alignment Length:169 Identity:40/169 - (23%)
Similarity:55/169 - (32%) Gaps:68/169 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 QRQSRAEKAMRRIDWYFLPLANPDGYQYSRQTDRLWTKNRGYDSVSGCY-----GVNLDRNFDYG 477
            |...||:...|...:..:|:.||||.                  |.|.|     ||||:|.:   
Zfish   269 QEDPRAQTLRRMFVFKLIPMLNPDGV------------------VRGHYRTDSRGVNLNRQY--- 312

  Fly   478 WDGTGSTSNPCKNLY---RGAHSFSEPESRAVCSFLSGMREYLGAYVSLG-GYGQAITYPWGDAD 538
                   .||..:|:   .||.|               :..|...:..|| ..|.|:.       
Zfish   313 -------VNPSPDLHPSIYGAKS---------------LMLYHHIHNRLGHASGSALK------- 348

  Fly   539 YVTENQRNLK-----QTARRAVLALRRLNQAEYSSGTSY 572
              |.||.|..     .|.|...:.|  ||:||...|.::
Zfish   349 --TSNQSNTSPPVATPTERERCMNL--LNEAERGEGPTF 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42264NP_572260.2 Propep_M14 <241..293 CDD:280416
M14_CP_A-B_like 328..633 CDD:199844 40/169 (24%)
agbl5XP_017210489.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.