DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42264 and sdc-3

DIOPT Version :9

Sequence 1:NP_572260.2 Gene:CG42264 / 31504 FlyBaseID:FBgn0259149 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:382 Identity:64/382 - (16%)
Similarity:116/382 - (30%) Gaps:152/382 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 QWLSPMDLRRFDFISPGSSYQINRRYRNGSQVQR----YYGFQLWKVHETRLEQPELRAFWRHFG 246
            ::.|..|..:|...:.|..|...|  ||..:|||    |..|:|.::.:.....||         
 Worm   646 EFASTSDFVKFPISNTGIKYTAPR--RNQPKVQRSLVTYTRFRLAELEDKDFSFPE--------- 699

  Fly   247 SEVWNINQDGIDILIEQRNVADARKFMDKVGYSYNIMIDDIESAIDESYVEVPAVEHPLDSVRNN 311
                             ..:.:..:.::|:.:...:.:|.:.|. |..|......|.....:::.
 Worm   700 -----------------EKMLEKNRLLEKLNFEERLQLDALMSK-DVKYKPRMIPEKGFLQLQDE 746

  Fly   312 SLPWMEVPGSTMNW-----RRYHDQADIKQFLQTLLETYSENVELI-----QIGVTRNK------ 360
            .|....:......|     ||:.|          |.|..::..|.:     ....|.||      
 Worm   747 KLILKRLCEKEDEWSGKQKRRFPD----------LYEQATQEAERLGDPDASTSGTSNKELGLLP 801

  Fly   361 -------RPLEVIRVSNGNPDNWAVFVDAGLQARDWLSPAALTYAISKL---------------- 402
                   |.|:.|.|               |.::::  |.:..|.|.:|                
 Worm   802 VWKHDDFRDLKKINV---------------LGSKEY--PISSPYLIKRLHYDIHLEIVRDKLKSW 849

  Fly   403 ---THLWGRPK--------GKDKGEGQ----------RQSRAEKAMRRIDW-------------- 432
               |.||.:.|        .|:|.|.:          ::.:.|:..||:|.              
 Worm   850 IYRTELWEKMKPVYERLKRDKEKREKEWHEMRAAQRAQKEKEEEDQRRMDMGIEHGQESLLKSIT 914

  Fly   433 ------YFLPLANPDGYQYSRQTDRLWTKNRGYDSVSGCYGVNLDRNFDYGWDGTGS 483
                  ..||::..:.::     :.|......||.       :||::.|..:||..|
 Worm   915 PEVEQQILLPISRENSFE-----EMLPAPQEAYDE-------DLDQDIDIHFDGAES 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42264NP_572260.2 Propep_M14 <241..293 CDD:280416 3/51 (6%)
M14_CP_A-B_like 328..633 CDD:199844 38/231 (16%)
sdc-3NP_506703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165682
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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