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Protein Alignment CG3097 and Cpb2

DIOPT Version :9

Sequence 1:	NP_572259.1	Gene:	CG3097 / 31503	FlyBaseID:	FBgn0029804	Length:	445	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	432	Identity:	154/432 - (35%)
Similarity:	227/432 - (52%)	Gaps:	52/432 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 LLVAAVAASLANELPSNLTLLDANEIPQRYDEAQLWRIYNISEAMQKRVPV-GQMLEQKFGGNIW 75
            :|.|....|...:|..|||        ..| |..||:            || .:.:|:|
Mouse    27 VLSALPRTSRQVQLLQNLT--------TTY-EVVLWQ------------PVTAEFIEKK------ 64

  Fly    76 KENSKFLDISIARDQLKAARSFLSAHRLDPQILSHNIQSMIDEELLEGIQSSSFGHGRRTKKAAR 140
            ||...|::.|    .:.:.::.|:..|:...:|.:|::.:|:::....           |.....
Mouse    65 KEVHFFVNAS----DVDSVKAHLNVSRIPFNVLMNNVEDLIEQQTFND-----------TVSPRA 114

  Fly   141 SSMHWKDYHDLETIYSFMREIRTKFPNIVRLYTIGQTAEGRDLKVLRIS-ENPRENKKVWIDGGI 204
            |:.:::.||.|..|||::..|..:.|::::...||.:.|...|.||::| :..|....:|||.||
Mouse   115 SASYYEQYHSLNEIYSWIEVITEQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRIKNAIWIDCGI 179

  Fly   205 HAREWISPA-TVTFILY--QLMSDWENQPAHIRGLTWYIMPVMNPDGYEYSRTTNRLWRKNRSPS 266
            ||||||||| .:.||.|  |...........:|.:.:|||||||.|||:|:...||:||||||..
Mouse   180 HAREWISPAFCLWFIGYVTQFHGKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAH 244

  Fly   267 RRAQCSGVDLNRNF-DIGWNGYGSSTNPCSDTYRGSAPASERETRAVAEFLAKRKYNLESYLTFH 330
            :..:|.|.|||||| ...|...|:|::.||:||.|..|.||.|.:|||:||.:...::::|::.|
Mouse   245 KNNRCVGTDLNRNFASKHWCEKGASSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIKAYISMH 309

  Fly   331 SYGQMIVYPWAYKAVKVKDASVLQRVSSLAAERI--LQKTGTSYRAAVTHEVLGIAGGGSDDWSR 393
            ||.|.|::|::|...|.||...|..|:|.|...|  :.| .|.|......|.|.:|.||||||.
Mouse   310 SYSQQILFPYSYNRSKSKDHEELSLVASEAVRAIESINK-NTRYTHGSGSESLYLAPGGSDDWI- 372

  Fly   394 AALGVKYVYTIELRDRGAYGFVLPPRFIKDTALEGWTVVETV 435
            ..||:||.:||||||.|.|||:||.|:||.|..|....:..:
Mouse   373 YDLGIKYSFTIELRDTGRYGFLLPERYIKPTCAEALAAISKI 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.