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Protein Alignment CG3097 and Cpa1

DIOPT Version :9

Sequence 1:	NP_572259.1	Gene:	CG3097 / 31503	FlyBaseID:	FBgn0029804	Length:	445	Species:	Drosophila melanogaster
Sequence 2:	NP_079626.2	Gene:	Cpa1 / 109697	MGIID:	88478	Length:	419	Species:	Mus musculus

Alignment Length:	435	Identity:	132/435 - (30%)
Similarity:	233/435 - (53%)	Gaps:	35/435 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 QLLLLVAAVAASLANE--LPSNLTLLDANEIPQRYDEAQLWRIYNISEAMQKRVPVGQMLEQKFG 71
            :||:|...:||...||  :...:..:.|.      ||||:.::..:.|....::
Mouse     3 RLLVLSVLLAAVFGNENFVGHQVLRISAT------DEAQVQKVRELEELEHLKL----------- 50

  Fly    72 GNIWKENSKF---LDISIARDQLKAARSFLSAHRLDPQILSHNIQSMIDEELLEGIQSSSFGHGR 133
             :.|::.::.   :|:.:....:::.::||..|.:..:|:..::||::|||..   |.|:|
Mouse    51 -DFWRDPARAGLPIDVRVPFPTIQSVKAFLEYHDISYEIMIEDVQSLLDEEKQ---QMSAF---- 107

  Fly   134 RTKKAARSSMHWKDYHDLETIYSFMREIRTKFPNIVRLYTIGQTAEGRDLKVLRISENPRENKKV 198
            :.:..:..:.::..||.|:.||.||..:.|:.|.:|....||.|.|||.:.||:.|........:
Mouse   108 QARALSTDAFNYATYHTLDEIYEFMDLLVTEHPQLVSKIQIGSTFEGRPINVLKFSTGGTNRPAI 172

  Fly   199 WIDGGIHAREWISPATVTFILYQLMSDWENQP---AHIRGLTWYIMPVMNPDGYEYSRTTNRLWR 260
            |||.|||:|||::.|:..:...::..|:..:|   |.:..:..::..|.||||:.|:..|||:||
Mouse   173 WIDTGIHSREWVTQASGVWFAKKITKDYGQEPTLTAILDNMDIFLEIVTNPDGFVYTHKTNRMWR 237

  Fly   261 KNRSPSRRAQCSGVDLNRNFDIGWNGYGSSTNPCSDTYRGSAPASERETRAVAEFLAKRKYNLES 325
            |.||.:..:.|.|||.|||:|..:...|:|:||||:||||..|.||.|.:::.:|:.... |:::
Mouse   238 KTRSHTEGSLCVGVDPNRNWDAAFGMPGASSNPCSETYRGKFPNSEVEVKSIVDFVTSHG-NIKA 301

  Fly   326 YLTFHSYGQMIVYPWAYKAVKVKDASVLQRVSSLAAERILQKTGTSYRAAVTHEVLGIAGGGSDD 390
            :::.|||.|:::||:.|.:....|...|.:::..|...:....||.::.....:.:..|.|.:.|
Mouse   302 FISIHSYSQLLLYPYGYTSEPAPDKEELDQLAKSAVTALTSLHGTKFKYGSIIDTIYQASGSTID 366

  Fly   391 WSRAALGVKYVYTIELRDRGAYGFVLPPRFIKDTALEGWTVVETV 435
            |:.:. |:||.:|.||||.|..||:||...|..||.|.|..:.|:
Mouse   367 WTYSQ-GIKYSFTFELRDTGLRGFLLPASQIIPTAEETWLALLTI 410

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.