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Protein Alignment lin-52 and wuc
DIOPT Version :9
Sequence 1: | NP_001284908.1 |
Gene: | lin-52 / 31499 |
FlyBaseID: | FBgn0029800 |
Length: | 157 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001097291.1 |
Gene: | wuc / 36401 |
FlyBaseID: | FBgn0033770 |
Length: | 136 |
Species: | Drosophila melanogaster |
Alignment Length: | 143 |
Identity: | 41/143 - (28%) |
Similarity: | 57/143 - (39%) |
Gaps: | 35/143 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 KDVPEVKERPITPEDELISMETLRPSPVQWP----ERFPGMDEFLSMSDTPMYTRSTNYTSNLTD 99
|.|.:..:|..:|.|| ..||...|:::. ||.....|....|. |......::.|
Fly 2 KKVTKSIKREGSPSDE---EYTLEEDPIEFELEKMERGSSNGESEEESQ-----RDQKQADSIID 58
Fly 100 D---------------------DMVKINELAQLPPEDLIDKIKSMHDEIYQLGLREAMEMTRGKL 143
| |:.|:.||:.|||..:..:|:.|..|||:|...||.|:.|.|.
Fly 59 DMVEQNDQEQEAAGEQDVERENDLRKMYELSLLPPAAIAAQIQQMEKEIYELSQWEARELIRSKH 123
Fly 144 LGIFD--RDRAPK 154
|.||. |.||.|
Fly 124 LRIFGNCRRRANK 136
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lin-52 | NP_001284908.1 |
LIN52 |
55..147 |
CDD:287062 |
29/116 (25%) |
wuc | NP_001097291.1 |
LIN52 |
<57..127 |
CDD:287062 |
21/69 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR31489 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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