Protein Alignment lin-52 and Lin52

DIOPT Version :9

• Sequence 1: NP_001284908.1
• Gene: lin-52 / 31499
• FlyBaseID: FBgn0029800
• Length: 157
• Species: Drosophila melanogaster
• Sequence 2: XP_006240418.1
• Gene: Lin52 / 362763
• RGDID: 1306798
• Length: 157
• Species: Rattus norvegicus
• Alignment Length: 128
• Identity: 35/128 - (27%)
• Similarity: 58/128 - (45%)
• Gaps: 23/128 - (17%)

  Fly    52 EDELISMETL-RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQLPPED 115
            |..|:|.|.| |.||..|||:.||:.||.:...:|:.:....:.:.:..||:..:.||..|...:
  Rat    15 EASLLSFEKLDRASPDLWPEQLPGVAEFAASFKSPITSSPPTWMAEIERDDIDMLKELGSLTTAN 79

  Fly   116 LIDKIKSMHDEIYQLGLREAMEMT----------------------RGKLLGIFDRDRAPKRQ 156
            |::|::.:.:..|||||.|..:..                      .|.||.:.|.:...||:
  Rat    80 LMEKVRGLQNLAYQLGLDECKDKPSEGSSRCFQLSVDSHQQSTPAGAGSLLPLLDFELHAKRK 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-52	NP_001284908.1	LIN52	55..147	CDD:287062	31/114 (27%)
Lin52	XP_006240418.1	LIN52	18..100	CDD:401871	28/81 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166340535
Domainoid	1	1.000	56	1.000	Domainoid score	I10783
eggNOG	1	0.900	-	-		E1_KOG4402
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I5331
OMA	1	1.010	-	-		QHG48791
OrthoDB	1	1.010	-	-		D1513733at2759
OrthoFinder	1	1.000	-	-		FOG0007389
OrthoInspector	1	1.000	-	-		oto98782
orthoMCL	1	0.900	-	-		OOG6_107514
Panther	1	1.100	-	-	LDO	PTHR31489
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X7386
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.770