DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4078 and Y54G2A.50

DIOPT Version :9

Sequence 1:NP_001259262.1 Gene:CG4078 / 31497 FlyBaseID:FBgn0029798 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001380098.1 Gene:Y54G2A.50 / 3896807 WormBaseID:WBGene00044493 Length:152 Species:Caenorhabditis elegans


Alignment Length:73 Identity:20/73 - (27%)
Similarity:28/73 - (38%) Gaps:22/73 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 KQQGGWLGKGTIAAATG---------------LSKVAK-IINFWCFNPGFGMEQLLNTQVRSVIL 478
            |.:..||..   |||.|               :|:..| .|..||.:|........| :.||::|
 Worm    23 KDENTWLAD---AAADGDGWKDPSISETGHKPISECGKTTIGLWCMSPALSFFDAFN-KTRSIVL 83

  Fly   479 TSGTLAPL 486
              .||.|:
 Worm    84 --ATLLPM 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4078NP_001259262.1 rad3 10..742 CDD:273169 20/73 (27%)
DEAD_2 111..274 CDD:284209
Helicase_C_2 546..725 CDD:290046
HN_RTEL1 896..985 CDD:259826
Y54G2A.50NP_001380098.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1199
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D186062at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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