Sequence 1: | NP_001259262.1 | Gene: | CG4078 / 31497 | FlyBaseID: | FBgn0029798 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_726036.2 | Gene: | Xpd / 37414 | FlyBaseID: | FBgn0261850 | Length: | 769 | Species: | Drosophila melanogaster |
Alignment Length: | 802 | Identity: | 209/802 - (26%) |
---|---|---|---|
Similarity: | 344/802 - (42%) | Gaps: | 180/802 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IAGIPVHFPFE-PYPVQRAYMEKVI-------HCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRT 62
Fly 63 RQSEHQKQMVKMEKADFSGLGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELK 127
Fly 128 RTAYANMR---------SVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSF-QMRVESR 182
Fly 183 KDHP--------DLRGPT------IMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLD 233
Fly 234 PK-ARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMA 297
Fly 298 GDEPKDFTLDDLTLLKEMLLELEKAI-DAIV---VDNAVDGTTFPASMMYELLGKANFTYGNVAT 358
Fly 359 ---IVSLLDKLVQYLLVASQQMSIRKGGTFTLLSDLLTIVFANKEDV------MSKVYASFKVHV 414
Fly 415 LVEESKQGHGKQQGAKQQGGWLGKGTIAA--ATGLSKVAK-------------------IINFWC 458
Fly 459 FNPGFGMEQLLNTQVRSVILTSGTLAPLK--PLIAELAIPVAQH-----LENPHIVDQSQVYVKI 516
Fly 517 IGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWA 581
Fly 582 DISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLP 646
Fly 647 FPPLKDPKVILKRR--YL-EANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCD 708
Fly 709 SRFKDASQVQQLSKWIRGHLGD 730 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4078 | NP_001259262.1 | rad3 | 10..742 | CDD:273169 | 208/798 (26%) |
DEAD_2 | 111..274 | CDD:284209 | 58/187 (31%) | ||
Helicase_C_2 | 546..725 | CDD:290046 | 64/181 (35%) | ||
HN_RTEL1 | 896..985 | CDD:259826 | |||
Xpd | NP_726036.2 | rad3 | 7..717 | CDD:273169 | 209/800 (26%) |
DEXDc2 | 8..280 | CDD:214693 | 91/334 (27%) | ||
HBB | 270..413 | CDD:284245 | 25/179 (14%) | ||
HELICc2 | 542..686 | CDD:214694 | 52/151 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467043 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1199 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 67 | 1.000 | Inparanoid score | I412 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR11472 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.900 |