| Sequence 1: | NP_001259262.1 | Gene: | CG4078 / 31497 | FlyBaseID: | FBgn0029798 | Length: | 985 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001178786.1 | Gene: | Rtel1 / 362288 | RGDID: | 1306721 | Length: | 1274 | Species: | Rattus norvegicus |
| Alignment Length: | 1037 | Identity: | 398/1037 - (38%) |
|---|---|---|---|
| Similarity: | 580/1037 - (55%) | Gaps: | 130/1037 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQS 65
Fly 66 EHQKQMVKMEKADFSGLGGGAPGGDLSELAKTMGRANN------WGVPKVIYASRTHSQLTQAMR 124
Fly 125 ELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLR 189
Fly 190 GPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEA 254
Fly 255 HNIEKICEESASVQIKSSDVAMAIEDVTHIMQ----VFASGESQDM----AGDEPKDFTLDDLTL 311
Fly 312 LKEMLLELEKAIDAIVVDNAVDGTTFPASMMYELLGKANFTYGNVATIVSLLDKLVQYLLVASQQ 376
Fly 377 MSIRKGGTFT------LLSDLLTIVFA---------NKEDVMSKVYASFKVHVLVEESKQGHGKQ 426
Fly 427 QGAKQQGGWLGKGTIAAATGLSKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIA 491
Fly 492 ELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDG 556
Fly 557 LLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRD--SKGAVFM 619
Fly 620 AVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRE---NQLLSGQEWYNL 681
Fly 682 DATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQ 746
Fly 747 FFKNAEANMKLP-DERETDSPLETVCKTEDEPLAA--------------IPKVKREPGSNATFKS 796
Fly 797 ANESAIKVEMANSIKTWTPADYASAAGHKLGGAAPNAMDFMSRLDSNVSSIDFNCCTDSKSGSSG 861
Fly 862 LVKIHKRERSSPTAP----ESSSQVT----KKRYKLVENIKVEPSSSQAKEAPEERAAFLRELRS 918
Fly 919 LVTQDQFRRFGKALLEYKNGTYESFQALMAILLDVLSA-PKVRYMLVGMRKYLKNEHKDEFD 979 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4078 | NP_001259262.1 | rad3 | 10..742 | CDD:273169 | 336/765 (44%) |
| DEAD_2 | 111..274 | CDD:284209 | 90/162 (56%) | ||
| Helicase_C_2 | 546..725 | CDD:290046 | 102/183 (56%) | ||
| HN_RTEL1 | 896..985 | CDD:259826 | 23/85 (27%) | ||
| Rtel1 | NP_001178786.1 | rad3 | 10..743 | CDD:273169 | 336/765 (44%) |
| P-loop_NTPase | 15..>86 | CDD:304359 | 35/75 (47%) | ||
| DEAD_2 | 111..272 | CDD:284209 | 90/162 (56%) | ||
| Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03065 | 151..167 | 2/15 (13%) | |||
| DEAH box | 250..253 | 2/2 (100%) | |||
| Helicase_C_2 | 545..731 | CDD:290046 | 103/185 (56%) | ||
| Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03065 | 871..877 | 1/5 (20%) | |||
| HN_RTEL1 | 877..976 | CDD:259826 | 25/95 (26%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 982..1002 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1014..1038 | ||||
| HN_RTEL1 | 1035..1137 | CDD:259826 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1143..1198 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166351720 | |
| Domainoid | 1 | 1.000 | 217 | 1.000 | Domainoid score | I2617 |
| eggNOG | 1 | 0.900 | - | - | E1_COG1199 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 1 | 1.000 | - | - | H13168 | |
| Inparanoid | 1 | 1.050 | 632 | 1.000 | Inparanoid score | I805 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0006111 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96319 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102317 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11472 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X4406 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.760 | |||||