Sequence 1: | NP_001259262.1 | Gene: | CG4078 / 31497 | FlyBaseID: | FBgn0029798 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038940692.1 | Gene: | Ddx11 / 316767 | RGDID: | 1306675 | Length: | 906 | Species: | Rattus norvegicus |
Alignment Length: | 947 | Identity: | 233/947 - (24%) |
---|---|---|---|
Similarity: | 382/947 - (40%) | Gaps: | 259/947 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWI---------- 60
Fly 61 ----------------------------------------------------------------- 60
Fly 61 --------------------RTRQSEHQ------------------KQMVKME-----------K 76
Fly 77 ADFSGLGGGAPGG--DLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELKRTAYA-NMRSVV 138
Fly 139 LGSRDQLCIHPEVMREQGNSNKTN-MC---KLRVHSK-----------------TCSF--QMRVE 180
Fly 181 SRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG 245
Fly 246 NTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMAGDEPKDFTLDDLT 310
Fly 311 LLKEMLLELEKAIDAIVVDNAVDGTTFPASMMY-----ELLGKANFTYGNVATIVSLLDKLVQYL 370
Fly 371 LVASQQMSIRKGGTFTLLSDLLTIVFANKEDVMSKVYASFKVHVLVEESKQGHGKQQGAKQ-QGG 434
Fly 435 ----WLGKGTIAAATGLSKVAKI----------------------------INFWCFNPGFGMEQ 467
Fly 468 LLNTQVRSVILTSGTLAPL----KPLIAELAIPVAQHLENP--HIVDQSQVYVKIIGTGPDRQQL 526
Fly 527 ISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFL 591
Fly 592 EPRSKDQFTSTMEEFYQAIRDSK-------GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPP 649
Fly 650 LKDPKVILKRRYLEANRTR-ENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKD 713
Fly 714 ASQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFK 749 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4078 | NP_001259262.1 | rad3 | 10..742 | CDD:273169 | 229/934 (25%) |
DEAD_2 | 111..274 | CDD:284209 | 60/186 (32%) | ||
Helicase_C_2 | 546..725 | CDD:290046 | 62/186 (33%) | ||
HN_RTEL1 | 896..985 | CDD:259826 | |||
Ddx11 | XP_038940692.1 | Csf4_U | 23..>113 | CDD:357161 | 19/89 (21%) |
rad3 | 225..889 | CDD:273169 | 190/709 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |