Sequence 1: | NP_001259262.1 | Gene: | CG4078 / 31497 | FlyBaseID: | FBgn0029798 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001166280.1 | Gene: | Ercc2 / 308415 | RGDID: | 1309109 | Length: | 760 | Species: | Rattus norvegicus |
Alignment Length: | 874 | Identity: | 229/874 - (26%) |
---|---|---|---|
Similarity: | 370/874 - (42%) | Gaps: | 211/874 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IAGIPVHFPFE-PYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQK 69
Fly 70 QMVKMEKADFSGLGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELKR--TAYA 132
Fly 133 NMR-------SVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHP---- 186
Fly 187 ------DLRG-----PT-IMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPK---- 235
Fly 236 -----ARKANKIELGNTIVILDEAHNIEKICEESASVQIK-------SSDVAMAIEDVTHIMQVF 288
Fly 289 ASGESQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAIVVDNAVDGTTFPASMMYELLGKANFTY 353
Fly 354 GNVAT---IVSLLDKLVQYLLVASQQMSIRKGGTFTLLSDLLTIVFANKEDV------MSKVYAS 409
Fly 410 FKVHVLVEESKQGHGKQQGAKQQGGWLGKGTIAA--ATGLSKVAK-------------------I 453
Fly 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYV---- 514
Fly 515 ----------KIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNK 569
Fly 570 CVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFAD 634
Fly 635 RNGRAVIITGLPFPPLKDPKVILKRR--YL-EANRTRENQLLSGQEWYNLDATRAVNQAIGRVIR 696
Fly 697 HRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Fly 762 ETDSPLETVCKTE---DEPLAAIPKVKRE 787 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4078 | NP_001259262.1 | rad3 | 10..742 | CDD:273169 | 216/820 (26%) |
DEAD_2 | 111..274 | CDD:284209 | 62/203 (31%) | ||
Helicase_C_2 | 546..725 | CDD:290046 | 64/181 (35%) | ||
HN_RTEL1 | 896..985 | CDD:259826 | |||
Ercc2 | NP_001166280.1 | rad3 | 7..708 | CDD:273169 | 217/819 (26%) |
DEXDc2 | 8..280 | CDD:214693 | 94/334 (28%) | ||
HBB | 272..413 | CDD:284245 | 29/180 (16%) | ||
HELICc2 | 542..686 | CDD:214694 | 53/151 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1199 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |