DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtel1 and DDX11

DIOPT Version :10

Sequence 1:NP_572254.1 Gene:Rtel1 / 31497 FlyBaseID:FBgn0029798 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_016874408.1 Gene:DDX11 / 1663 HGNCID:2736 Length:1091 Species:Homo sapiens


Alignment Length:905 Identity:197/905 - (21%)
Similarity:340/905 - (37%) Gaps:283/905 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQ 70
            :..|...|||.||.:|..:|.::...|..|..|:.||||||||:|||:|.:|:|:|..:.:.:::
Human    44 VGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 108

  Fly    71 MVKM----------EKAD----FSGLGGGA----PGGD--------------------------- 90
            ..::          ||.:    .|...|.|    |.|:                           
Human   109 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARR 173

  Fly    91 -----------------------------------LS-ELAKTMGRANNW--------------- 104
                                               || |:.:|...|...               
Human   174 KQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETGPEAERLEQLESGEEELVLAEY 238

  Fly   105 ----------------------GVPKVIYASRTHSQLTQAMRELKRTAYA-NMRSVVLGSRDQLC 146
                                  .:.|:.|.|||||||.|.:.|:|::.:. ::|.|.||||..||
Human   239 ESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLC 303

  Fly   147 IHPEVMREQG-----NSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRGP--------------- 191
            ::.:| :..|     |....:|.:.|...|..:.:.:.:.|:.......|               
Human   304 VNEDV-KSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEAL 367

  Fly   192 -TIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAH 255
             .:.|:|.|:.:|:..:.|||:.||..:|.|.:..:||..||....|:|..|.|.:.:||:||||
Human   368 AEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAH 432

  Fly   256 NIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMAGDEPKDFTLDDLTLLKEMLLELE 320
            |:........||::..|.:..|...:...::.:.            |.....:|..||::|..||
Human   433 NLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYG------------KRLKAKNLMYLKQILYLLE 485

  Fly   321 KAIDAIVVDN----------AVDGTTFPASMMYELLGKANFTYGNVATIVSLLDKLVQYLLVASQ 375
            |.: |::..|          :..||        ||....:|.:.:....::|. |:.:|   ..:
Human   486 KFV-AVLGGNIKQNPNTQSLSQTGT--------ELKTINDFLFQSQIDNINLF-KVQRY---CEK 537

  Fly   376 QMSIRKGGTFTLLSDLLTIVFANKEDVMSKVYASFKVHVLVEESKQGHGKQQGA----KQQGGWL 436
            .|..||...||   :....||:::|......:..|.      :|.|....:..|    :.|...|
Human   538 SMISRKLFGFT---ERYGAVFSSREQPKLAGFQQFL------QSLQPRTTEALAAPADESQASTL 593

  Fly   437 G--------KGTIAAATGLSKVAKII------------NFWCFNPGFGMEQLLNTQVRSVILTSG 481
            .        :|.:||.|..::..::|            .|...||.....|::. :.|:|::..|
Human   594 RPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVK-ECRAVVIAGG 657

  Fly   482 TLAPL-----KPLIAELAIP--------------------------------------------- 496
            |:.|.     .||:.....|                                             
Human   658 TMQPAAGAVETPLLLHSVAPGSHVSQRKLFCGFKLKEKNHDSTFKRCLTSGSSCWPVPGWKLSAW 722

  Fly   497 ------VAQHLE----------NPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQT 545
                  :|.||.          ..|::....:...:|.:|...|.|...:..|:.|:.:..:|:.
Human   723 WSFPVCLAAHLHLQFSAPPWLLPGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRI 787

  Fly   546 ILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAI 610
            :.|:..:||.|::.|||||..|.:....|:..||...::.:|.||.||:|..|....:..:.:.|
Human   788 LCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCI 852

  Fly   611 R-------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLE 663
            :       ...||:.::|..||:|||::|:|..||.|::.|:|||.::..::..|..||:
Human   853 QACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLD 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtel1NP_572254.1 rad3 10..742 CDD:273169 196/901 (22%)
HN_RTEL1 896..985 CDD:259826
DDX11XP_016874408.1 rad3 263..918 CDD:273169 159/686 (23%)
Blue background indicates that the domain is not in the aligned region.

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