DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtel1 and LOC1281639

DIOPT Version :10

Sequence 1:NP_572254.1 Gene:Rtel1 / 31497 FlyBaseID:FBgn0029798 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_321585.5 Gene:LOC1281639 / 1281639 VectorBaseID:AGAMI1_004152 Length:910 Species:Anopheles gambiae


Alignment Length:930 Identity:241/930 - (25%)
Similarity:412/930 - (44%) Gaps:217/930 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW----IRT 62
            ||.   |....|||.||.:|..:|:.:...:..|..|:.||||||||:|||.|.:|.|    :|.
Mosquito    13 PEK---GSDFAFPFLPYDIQLDFMKTLYTVIHSGGIGIFESPTGTGKSLSLTCGTLTWLKDYVRL 74

  Fly    63 RQSEHQKQMV-------KMEK----------ADFSGLG--------------------------- 83
            .::|.|:::|       ::||          ..:|.:|                           
Mosquito    75 MEAELQEKIVRLRAEIARLEKENESSSDWISGQYSAMGQRKELDVLNHFKQSIEEYQKHLLRMKD 139

  Fly    84 --------------------------------------GGAPGGDLSELAKTMGRANNWGVPKVI 110
                                                  ..:.|.|....|........:...:||
Mosquito   140 RAVLHKIRLEKIRTKDDTLREEPLQQDVTIDEDEFLLPEESDGSDEETEADCEKDEEQYRPVQVI 204

  Fly   111 YASRTHSQLTQAMRELKRTAYA-NMRSVVLGSRDQLCIHPEVMR---------------EQGNSN 159
            :.|||||||:|.:.|:|.|.:: ::|.:.|.||..|||:.:|.:               .:|..|
Mosquito   205 FCSRTHSQLSQVVSEVKETEHSKDLRLMSLASRQSLCINADVRKLKSSTLINERCLELLNKGGKN 269

  Fly   160 KT----------NMCKLRVHSKTCSF--QMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYF 212
            |.          ::.|.|..:::|.:  |..:|..|:......|   |||||||.|:|.:.|||:
Mosquito   270 KASAGDEGDDGRSVKKRRKLTQSCPYYNQRAIEGLKNGILFEVP---DIEDLVKAGKREQACPYY 331

  Fly   213 ASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMA 277
            |||..:|.|.:..:||..:|..:.|:.:.|.|.:.|:|:|||||:........|.:::...:.:|
Mosquito   332 ASRAAIPDAQVLMVPYQLILHRRTRQQSGIRLQDAILIIDEAHNLLDTISAIHSQEVRLEQLRLA 396

  Fly   278 IEDVTHIMQVFASGESQDMAGDEPKDFTLDDLTLLKEMLL---ELEKAIDAIVVDNAVDGTTFPA 339
               ..|:....|...|:         |:..:|..:.:::.   .|.|.:       :.:|::...
Mosquito   397 ---KVHLSAYKARYFSR---------FSTKNLLRINQLIFIATRLGKVL-------SPEGSSTNR 442

  Fly   340 SMM---YELLGKANFTYGNVATIVSLLD--KLVQYL----------LVASQQMSIR-------KG 382
            |.|   .|||.:|:....|::.|:|..:  ::.|.:          |:.....|||       ||
Mosquito   443 SRMLETQELLLEADVFNLNLSDILSFCERSRIAQKVHGFAQSAAPELLEQNAPSIRSKVGTTSKG 507

  Fly   383 GTFTLLSDLLTIVFANKEDVMSKVY-------ASFKVHVLVEESKQGHGKQQGAK---------- 430
            .|    |:|.:::...:||..||..       ||.:.......|.|.:.:|..:|          
Mosquito   508 ST----SELKSLLKNLEEDYKSKSQKKKAGRPASKQAVESAPVSNQENDQQLQSKPSVTNAIRPL 568

  Fly   431 ---------QQGGWLGKGTIAAA---TGLSKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTL 483
                     ..||..|...:..:   ..||:.:  :.:...|||...|.::.: .|||:|..||:
Mosquito   569 INFLECLVEDAGGGSGDSRVMISFDEKDLSQAS--MKYLLLNPGGKFEDIVQS-CRSVVLAGGTM 630

  Fly   484 APLKPLIAEL------AIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSL 542
            .|.:.|..::      .:.:..:   ||:|.:..|....:|.||..::.:.||.|:.|.:.:..|
Mosquito   631 QPTEELTEQVFRNCRERVTIKSY---PHVVPKDAVLPIALGRGPTGKEFLFNYNNKHNVEMLDEL 692

  Fly   543 GQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFY 607
            ..|:||::::||.|::|||.||..|:......:.||..|.:..:|.:|.||::..|...|:.|:.
Mosquito   693 QSTLLNISQVVPHGVVVFFSSYDFLDLFTRKLEESGNRARLEERKKVFREPKTSGQVEKTLSEYG 757

  Fly   608 QAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQL 672
            :|.|.:.||:..:|..||:||||:|:|:.||.|::.|||:|....|::..:.|||:.:.......
Mosquito   758 RAARSATGAILFSVVGGKLSEGLNFSDQLGRCVVVVGLPYPNRTSPELCERMRYLDRSLAGATSG 822

  Fly   673 LS--GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQV-QQLSKWIRGHLGDRPQC 734
            .|  |.|:|.....:||||.|||.:||..||.|::|.|:|:....:: ::|..||    .:|.:|
Mosquito   823 ASSAGNEYYENLCMKAVNQCIGRAVRHIRDYAAVILLDTRYCTGERIRRKLPVWI----SERMEC 883

  Fly   735 SP-FGPIVRELRQFFKNAEA 753
            :. :|....:|.:||::.:|
Mosquito   884 AERYGQAHGKLVKFFRDHKA 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtel1NP_572254.1 rad3 10..742 CDD:273169 234/909 (26%)
HN_RTEL1 896..985 CDD:259826
LOC1281639XP_321585.5 None
Blue background indicates that the domain is not in the aligned region.

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