DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtel1 and rtel1

DIOPT Version :10

Sequence 1:NP_572254.1 Gene:Rtel1 / 31497 FlyBaseID:FBgn0029798 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_031750114.1 Gene:rtel1 / 100487920 XenbaseID:XB-GENE-6035930 Length:1269 Species:Xenopus tropicalis


Alignment Length:1038 Identity:394/1038 - (37%)
Similarity:574/1038 - (55%) Gaps:127/1038 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQS 65
            ||:..:||:.|.|||:||..|..||.|||.||:.|.||||||||||||||.|||::|||     .
 Frog     1 MPQVPVAGLTVDFPFQPYKCQEDYMGKVIQCLQQGVNGVLESPTGTGKTLCLLCATLAW-----R 60

  Fly    66 EHQKQMV-------KMEKAD-FSGLGGGAPGGDLSELAKTMGRANNW--GVPKVIYASRTHSQLT 120
            :|.|..:       :|..|: |......|.||     |...|:|:.:  .|||:|||||||||||
 Frog    61 QHYKDGISARKIAERMNGAELFPERPAAAWGG-----ASAEGQASAYYSDVPKIIYASRTHSQLT 120

  Fly   121 QAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDH 185
            |.:.|||.|.| ..:..|||||:||||||||.:::.|..|.:||:.:|.::||.|...||.:...
 Frog   121 QVISELKHTVY-RPKVCVLGSREQLCIHPEVKKQESNHAKVHMCRSKVSTRTCHFYNNVEEKSTE 184

  Fly   186 PDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVI 250
            .||.. .|:|||||||.|.:.:.|||:.||.|..||||.|||||||||||:|:|:.|:|..|:||
 Frog   185 KDLTN-HILDIEDLVKSGTKHRACPYYLSRNLKQQADIIFMPYNYLLDPKSRRAHNIDLKGTVVI 248

  Fly   251 LDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMAGDEPK----DFTLD---- 307
            .|||||:|::||:|:|..:...|:|..|:.:..:::       :.|...|.|    :|.:|    
 Frog   249 FDEAHNVERMCEDSSSFDLTPYDLASGIDAMDLVLK-------EQMENVEQKRYQAEFNMDSQSS 306

  Fly   308 -------DLTLLKEMLLELEKAIDAIVVDNAVDGTTFPASMMYELLGKANFTYGNVATIVSLLDK 365
                   ||..:|..|::||.:|::..:.....|.|...|.:::|...:..|:...|.::..|::
 Frog   307 GLTLELEDLAKVKAALMQLENSIESTQLPPGGGGVTKVGSYIFQLFAASGITFDTKAKLLESLEQ 371

  Fly   366 LVQYLLVASQQMSIRKGGTFT------LLSDLLTIVF-------ANKEDVMSKVYASFKVHVLVE 417
            ::|::..:|        |.||      .|:|::.|||       ||.......:...:|||:..:
 Frog   372 IIQHVGGSS--------GIFTNTMGLQKLADIIQIVFSMEPPEGANVSSFNQNISKYYKVHIHPD 428

  Fly   418 ESKQGHGKQQG-----AKQQGGWLGKGTIAAATGLSKVAKIINFWCFNPGFGMEQLLNTQVRSVI 477
            .:::  .|.:|     :|:|||                 |::::|||:||:.|..|:...||.||
 Frog   429 TNQR--KKPRGDVWSNSKKQGG-----------------KVLSYWCFSPGYTMHDLVRQGVRCVI 474

  Fly   478 LTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSL 542
            ||||||.||.....|:.||....|||||::|:.|::|.|:..|||..||.|:|..|.:.:|:|||
 Frog   475 LTSGTLCPLSSFTMEMQIPFPVSLENPHVIDKHQIWVGIVPRGPDGSQLSSSYDRRFSEEYLSSL 539

  Fly   543 GQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFY 607
            |:||.|:||:||.||||||||||:|:|.::.|:..||.|.|...||:|:|||.|..||..::.:|
 Frog   540 GKTIGNIARVVPHGLLVFFPSYPVLDKSIEFWKERGLSAKIDDVKPMFVEPRGKGSFTEVIDAYY 604

  Fly   608 QAIR--DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTREN 670
            :.||  :..||.|:||||||.||||||||.|||.||||||||||..||:|:||.::|:..|..:.
 Frog   605 EKIRSANGSGASFLAVCRGKASEGLDFADNNGRGVIITGLPFPPRMDPRVVLKMQFLDEMRRSQG 669

  Fly   671 Q---LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRP 732
            .   .|||||||...|:||||||||||||||||||||.|||.||..:....||..|:|.::....
 Frog   670 SAGLYLSGQEWYRQQASRAVNQAIGRVIRHRNDYGAIFLCDHRFNQSDARAQLPSWVRPYVRTYD 734

  Fly   733 QCSPFGPIVRELRQFFKNAEANMKLP----DERETDSPLETVCKTEDEPLAAIPKVKREPGSNAT 793
            .   ||.|:|::.|||:.|...|..|    |::|...||.........|:|  |...||....|.
 Frog   735 N---FGHIIRDVSQFFRVALKIMPTPTLHSDQKEGPVPLIGCSSQSPRPVA--PSSSREAPKKAK 794

  Fly   794 FKSANESAIKVEMANSIKTWTPADYASAAGHKLGGAAPNAMDFMSRLDSNVSSIDFNCCTDSKSG 858
            ...::..::|.:.........|.........::..::......:..|:.:...:.     :.|:|
 Frog   795 TLDSHVPSLKRKRDECSSEVVPGSVCEGYEQEVPMSSQRPAGLLDALEHSEKRVQ-----EEKAG 854

  Fly   859 SSGLVKIHKRERSSPTAPESSSQVT------KKRYKLVENIKVEPSSSQAKEAPEERAAFLRELR 917
                   .|..|.|..:.:...::.      |::.|:|:|...|.:|.|...:   .:.||..::
 Frog   855 -------EKVSRLSTLSLQYDKRLADEQRGGKRKIKIVQNRAPEDTSDQKMTS---ASLFLVSVK 909

  Fly   918 SLVTQDQFRRFGKALLEYKNGTYESFQALMAILLDVLSAPKVRY-MLVGMRKYLKNEHKDEFD 979
            ..::|:.:..|..|:.|||..  ...|.|::.|..:......:| :|.|..::::.:||.|||
 Frog   910 QSLSQENYGTFMAAMTEYKKN--NDLQQLISHLRTLFCQDPAKYNLLRGFYQFIRPQHKLEFD 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtel1NP_572254.1 rad3 10..742 CDD:273169 339/779 (44%)
HN_RTEL1 896..985 CDD:259826 22/85 (26%)
rtel1XP_031750114.1 rad3 8..741 CDD:273169 340/781 (44%)
HN_RTEL1 881..981 CDD:259826 25/95 (26%)
HN_RTEL1 1028..1128 CDD:259826
RING_Ubox 1207..1256 CDD:473075
Blue background indicates that the domain is not in the aligned region.

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