DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS6 and ints6l

DIOPT Version :10

Sequence 1:NP_572253.2 Gene:IntS6 / 31496 FlyBaseID:FBgn0261383 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_001016198.1 Gene:ints6l / 548952 XenbaseID:XB-GENE-964063 Length:896 Species:Xenopus tropicalis


Alignment Length:933 Identity:349/933 - (37%)
Similarity:485/933 - (51%) Gaps:186/933 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQRTQDCLGDRYMLLTFEEPPANV 65
            |.|:|||:|||:||.|:.|:.   .|||||||||||.|:|.|.|.....||||||:|::|||..:
 Frog     1 MPILLFLIDTSASMNQRTYLG---TTYLDIAKGAVEIFMKLRARDPASRGDRYMLVTYDEPPYCI 62

  Fly    66 KAGWKENHATFMNELKNLQSHGLTSMGESLRNAFDLLNLNRMQSGIDTYGQGRCPFYLEPSVIIV 130
            |||||||||||||||||||:.|||::|::||::||||||||:.||||.|||||.||:||||::|.
 Frog    63 KAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLVSGIDNYGQGRNPFFLEPSILIT 127

  Fly   131 ITDGGRYSYRNGVHQEIILPLSNQIPGTKFTKEPFRWDQRLFSLVLRMPG-NKIDERVDGKVPHD 194
            ||||.:.:....|.:|:.|||::.:||::.||||||||||||:||||:|| :.::....|.||.|
 Frog   128 ITDGNKLTSTASVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGASSVEPEQVGGVPSD 192

  Fly   195 DSPIERMCEVTGGRSYRVRSHYVLNQCIESLVQKVQPGVVLQFEPMLPKEATSATAGEAAGASTI 259
            ||.|.:||||||||||.||:..:||||:||||||||.|||:.||...|....::..|.|...   
 Frog   193 DSAISQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKTGPDPTPNSEDGLADSL--- 254

  Fly   260 SGMGISSTSGAGPAPDIVFQP-----VKKMIYVQKHITQKT-FPIGYWPLPEPYWPDSKAITLPP 318
                         .|..:|.|     ..|:|||:.:  .|| .|:|:||:||.:|||..:.||||
 Frog   255 -------------RPTHLFAPQAWHTCHKLIYVRPN--PKTGVPVGHWPIPESFWPDQNSPTLPP 304

  Fly   319 RDAHPKLKVLTPAVD-EPQLVRSFPVDKYEIEGCPLTLQILNKREMNKCWQVIVTNGMHGFEL-- 380
            |.|||.::.  ..:| ||.::...|.||||:|..|||..||.::..:.||||.|.:.....|:  
 Frog   305 RTAHPVVRF--SCLDCEPMVIDKLPFDKYELEPSPLTQFILERKSPHTCWQVFVNSSGKYSEIGQ 367

  Fly   381 PFGYLKAAPNFSQVHLYVLAYNYPALLPILHDLIHKYNMSPPSDLMYKFNAYVRSIPPYYCPFLR 445
            |||||||:...:.|:|:|:.||||.|||:|.||...:.:.|.......|:.|::::|||:...|:
 Frog   368 PFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPTLKWRQTFDNYLKTMPPYFLMPLK 432

  Fly   446 KALVNINVPYQLLQFLLPENVDNYLSPTIANQLKHIKNTAKQDQENLCMKVYKQLKQPKPPYRQV 510
            |||..:..|.     |:.||:|..||.::.:.||.:....|.:.|.:...|.|:..|        
 Frog   433 KALRMMGAPN-----LISENLDCGLSYSVISYLKKLSQQTKIESERIIASVGKKAPQ-------- 484

  Fly   511 ETGKLFTGAPLRRDLVRHPLLRDIFSKLHG----------EIDPVENYTIVVPQPTHQSSAKSHR 565
            |||........|..||.:   ||....|.|          ||:..|.....|.........:::|
 Frog   485 ETGIKVKNNSTRLSLVHN---RDFKQLLQGFCNESSIRVSEINVKEFPGFQVGLLNKDLKPQTYR 546

  Fly   566 NPFDIPRRDLVEEIAKMRETLLRPVSLVA---KDSGHCLPIAEMGNYQEYLKNKDNPLREIEPTN 627
            |.:|||||:|::::.:||..||:...|:.   :|..|.:|:|:|||||||||:..:|||||:|..
 Frog   547 NAYDIPRRNLLDQLTRMRTNLLKTHKLIVGQDEDCLHSVPVAQMGNYQEYLKSMPSPLREIDPDQ 611

  Fly   628 -VRQHMFGNPYKKDKHMVMVDEADLSDVAPMKSPNGNGPGGAP----------------PGSP-- 673
             .|.|.||||:|:||..:|:||||.....|.......|....|                |.:|  
 Frog   612 PKRLHTFGNPFKQDKKGMMIDEADEFVAGPQNKIKRPGESNTPASLKRRRSMSPLLLRRPQTPPI 676

  Fly   674 -----SGSGSPTGPGPSSPGSSPGGGSGPGMPGMPGMGGGMSGLMLGAGGSGGSSKKLDGTSRGR 733
                 .|.|.||.||    ||.......| :|.......     :|.|.|:|   ::||.     
 Frog   677 ITNHVGGKGPPTSPG----GSITHNLIKP-IPVHKDTNN-----VLTAEGNG---ERLDN----- 723

  Fly   734 KRKAGPLPRSFEFRRSSTDSRSSSSGSESSTTGSAPGSPIPGATSSISGCDSAMGADGGPS---S 795
                                                |.|:          :..|  ||.|.   |
 Frog   724 ------------------------------------GQPL----------EKQM--DGLPPLIVS 740

  Fly   796 SCFDEDSNSNSSFVSSTSEASA-SDSGMSNSHLDPLRISFVFIEEETSDQDTPLNGYVHNFINGI 859
            |..|::...::.|.:.|.|.:. ||.|:                     :..|:|.     :.|.
 Frog   741 SALDDEVVVSNDFHTVTDELNCFSDDGL---------------------EQKPVNN-----VKGP 779

  Fly   860 SDD----AETGETEAVPGGASLP 878
            ||:    .|:|:.:....|:.:|
 Frog   780 SDNYMPAEESGDVQECTSGSCVP 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS6NP_572253.2 VWA_2 4..131 CDD:463909 84/126 (67%)
INT_SG_DDX_CT_C 1196..1256 CDD:464626
ints6lNP_001016198.1 VWA_2 4..103 CDD:463909 66/101 (65%)
INT_SG_DDX_CT_C 814..875 CDD:464626
Blue background indicates that the domain is not in the aligned region.

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