DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS6 and INTS6

DIOPT Version :9

Sequence 1:NP_001259259.1 Gene:IntS6 / 31496 FlyBaseID:FBgn0261383 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_036273.1 Gene:INTS6 / 26512 HGNCID:14879 Length:887 Species:Homo sapiens


Alignment Length:918 Identity:354/918 - (38%)
Similarity:489/918 - (53%) Gaps:156/918 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQRTQDCLGDRYMLLTFEEPPANV 65
            |.|:|||:|||:||.|::::.   .||||.||||||||:|.|.|.....||||||:||||||..:
Human     1 MPILLFLIDTSASMNQRSHLG---TTYLDTAKGAVETFMKLRARDPASRGDRYMLVTFEEPPYAI 62

  Fly    66 KAGWKENHATFMNELKNLQSHGLTSMGESLRNAFDLLNLNRMQSGIDTYGQGRCPFYLEPSVIIV 130
            |||||||||||||||||||:.|||::|:|||.|||||||||:.:|||.|||||.||:|||::||.
Human    63 KAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIT 127

  Fly   131 ITDGGRYSYRNGVHQEIILPLSNQIPGTKFTKEPFRWDQRLFSLVLRMPGNKI--DERVDGKVPH 193
            ||||.:.:..:||..|:.|||::.:||::.||||||||||||:||||:||...  .|::.| ||.
Human   128 ITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVESEQLTG-VPL 191

  Fly   194 DDSPIERMCEVTGGRSYRVRSHYVLNQCIESLVQKVQPGVVLQFEPMLPKEATSATAGEAAGAST 258
            |||.|..||||||||||.|.|..:||||:||||||||.|||:.||...| :.:....|:.     
Human   192 DDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGP-DPSPVEDGQP----- 250

  Fly   259 ISGMGISSTSGAGPAPDIVFQPVKKMIYVQKHITQKT-FPIGYWPLPEPYWPDSKAITLPPRDAH 322
                .||...|:.|     :....|:|||:.:  .|| .|||:||:||.:|||..:.|||||.:|
Human   251 ----DISRPFGSQP-----WHSCHKLIYVRPN--PKTGVPIGHWPVPESFWPDQNSPTLPPRTSH 304

  Fly   323 PKLKVLTPAVD-EPQLVRSFPVDKYEIEGCPLTLQILNKREMNKCWQVIVTNGMHGFEL--PFGY 384
            |.:|.  ...| ||.::...|.||||:|..|||..||.::....||||.|:|.....||  ||||
Human   305 PVVKF--SCTDCEPMVIDKLPFDKYELEPSPLTQFILERKSPQTCWQVYVSNSAKYSELGHPFGY 367

  Fly   385 LKAAPNFSQVHLYVLAYNYPALLPILHDLIHKYNMSPPSDLMYKFNAYVRSIPPYYCPFLRKALV 449
            |||:...:.|:|:|:.||||.|||:|.||...:...|.......|.:|::::||||...|:||:.
Human   368 LKASTALNCVNLFVMPYNYPVLLPLLDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVR 432

  Fly   450 NINVPYQLLQFLLPENVDNYLSPTIANQLKHIKNTAKQDQENLCMKVYKQLKQPKPPYRQVETG- 513
            .:..|.     |:.::::..||.::.:.||.:...||.:.:.:...|.|::.|        ||| 
Human   433 MMGAPN-----LIADSMEYGLSYSVISYLKKLSQQAKIESDRVIGSVGKKVVQ--------ETGI 484

  Fly   514 KLFT-----GAPLRRDLVRHPLLRDIFSKL-HGEID-PVENYT-IVVPQPTHQSSAKSHRNPFDI 570
            |:.:     ....|:|.  ..||:.|...: |..:| .::.|| ..|.........::.||.:||
Human   485 KVRSRSHGLSMAYRKDF--QQLLQGISEDVPHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDI 547

  Fly   571 PRRDLVEEIAKMRETLLRPVSLVAK----DSGHCLPIAEMGNYQEYLKNKDNPLREIEPTNVRQ- 630
            |||:|::.:.:||..||:......|    |..|.:|||:|||||||||...:||||::|...|: 
Human   548 PRRNLLDHLTRMRSNLLKSTRRFLKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRL 612

  Fly   631 HMFGNPYKKDKHMVMVDEADLSDVAPMKSPNGNGPGGAPPGSPSGSGSPTGPGPSSPGSSPGGGS 695
            |.||||:|.||..:|:|||| ..||                           ||.:....||   
Human   613 HTFGNPFKLDKKGMMIDEAD-EFVA---------------------------GPQNKHKRPG--- 646

  Fly   696 GPGMPGMPGMGGGMSGLMLGAGGSGGSSKKLDGTSRGRKRKAGPLPRSFEFRRSSTDSRSSSSGS 760
            .|.|.|:|.....||.|:.|                   |:..|:          .::.....|.
Human   647 EPNMQGIPKRRRCMSPLLRG-------------------RQQNPV----------VNNHIGGKGP 682

  Fly   761 ESSTTGSAPG--SPIPGATSSISGCDSAMGADGGPSSSCFDEDSNSNSSFVSSTSEASASDSGMS 823
            .:.||.:.|.  .|:|....|.:..||.:          .|...|..:..:||....:|.|:..|
Human   683 PAPTTQAQPDLIKPLPLHKISETTNDSII----------HDVVENHVADQLSSDITPNAMDTEFS 737

  Fly   824 NS-----------HLDPLRISFVFIEEETSDQDTPLNGYVHNFINGISDDAETGETEAVPGGASL 877
            .|           |::.|.      .:.....|..:.|::.|  :....|.|....|.:|     
Human   738 ASSPASLLERPTNHMEALG------HDHLGTNDLTVGGFLEN--HEEPRDKEQCAEENIP----- 789

  Fly   878 PGASSANE 885
              |||.|:
Human   790 --ASSLNK 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS6NP_001259259.1 vWFA 4..>147 CDD:238119 92/142 (65%)
INT_SG_DDX_CT_C 1196..1257 CDD:291946
INTS6NP_036273.1 VWA_2 4..103 CDD:404413 69/101 (68%)
INT_SG_DDX_CT_C 809..868 CDD:405888
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160426
Domainoid 1 1.000 338 1.000 Domainoid score I1109
eggNOG 1 0.900 - - E1_KOG3768
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 568 1.000 Inparanoid score I1074
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D551849at2759
OrthoFinder 1 1.000 - - FOG0003020
OrthoInspector 1 1.000 - - otm42293
orthoMCL 1 0.900 - - OOG6_103620
Panther 1 1.100 - - LDO PTHR12957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3035
SonicParanoid 1 1.000 - - X2010
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.790

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