DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS6 and Ints6

DIOPT Version :9

Sequence 1:NP_001259259.1 Gene:IntS6 / 31496 FlyBaseID:FBgn0261383 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_006518743.1 Gene:Ints6 / 18130 MGIID:1202397 Length:884 Species:Mus musculus


Alignment Length:978 Identity:363/978 - (37%)
Similarity:491/978 - (50%) Gaps:179/978 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQRTQDCLGDRYMLLTFEEPPANV 65
            |.|:|||:|||:||.|::::.   .||||.||||||||:|.|.|.....||||||:||||||..:
Mouse     1 MPILLFLIDTSASMNQRSHLG---TTYLDTAKGAVETFMKLRARDPASRGDRYMLVTFEEPPYAI 62

  Fly    66 KAGWKENHATFMNELKNLQSHGLTSMGESLRNAFDLLNLNRMQSGIDTYGQGRCPFYLEPSVIIV 130
            |||||||||||||||||||:.|||::|:|||.|||||||||:.:|||.|||||.||:|||::||.
Mouse    63 KAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIT 127

  Fly   131 ITDGGRYSYRNGVHQEIILPLSNQIPGTKFTKEPFRWDQRLFSLVLRMPGNKI--DERVDGKVPH 193
            ||||.:.:..:||..|:.|||::.:||::.||||||||||||:||||:||...  .|::.| ||.
Mouse   128 ITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVESEQLTG-VPL 191

  Fly   194 DDSPIERMCEVTGGRSYRVRSHYVLNQCIESLVQKVQPGVVLQFEPMLPKEATSATAGEAAGAST 258
            |||.|..||||||||||.|.|..:||||:||||||||.|||:.||...|....:...|:.     
Mouse   192 DDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPPPAEAEGQP----- 251

  Fly   259 ISGMGISSTSGAGPAPDIVFQPVKKMIYVQKHITQKT-FPIGYWPLPEPYWPDSKAITLPPRDAH 322
                .||...|:.|     :....|:|||:.:  .|| .|||:||:||.:|||..:.|||||.:|
Mouse   252 ----DISRPFGSQP-----WHSCHKLIYVRPN--PKTGVPIGHWPVPESFWPDQNSPTLPPRTSH 305

  Fly   323 PKLKVLTPAVD-EPQLVRSFPVDKYEIEGCPLTLQILNKREMNKCWQVIVTNGMHGFEL--PFGY 384
            |.:|.  ...| ||.::...|.||||:|..|||..||.::....||||.|:|.....||  ||||
Mouse   306 PVVKF--SCTDCEPMVIDKLPFDKYELEPSPLTQFILERKSPQTCWQVYVSNSAKYNELGHPFGY 368

  Fly   385 LKAAPNFSQVHLYVLAYNYPALLPILHDLIHKYNMSPPSDLMYKFNAYVRSIPPYYCPFLRKALV 449
            |||:...:.|:|:|:.||||.|||:|.||...:...|.......|.:|::::||||...|:||:.
Mouse   369 LKASTALTCVNLFVMPYNYPVLLPLLDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVR 433

  Fly   450 NINVPYQLLQFLLPENVDNYLSPTIANQLKHIKNTAKQDQENLCMKVYKQLKQPKPPYRQVETGK 514
            .:..|.     |:.::::..||.::.:.||.:...||.:.:.:...|.|::.|.           
Mouse   434 MMGAPN-----LIADSMEYGLSYSVISYLKKLSQQAKIESDRVIGSVGKKVVQE----------- 482

  Fly   515 LFTGAPLRRDLVRHPLL---RDIFSKLHGEIDPV---------ENYT-IVVPQPTHQSSAKSHRN 566
              ||..:|..  .|.|.   |..|..|.|..:.|         :.|| ..|.........::.||
Mouse   483 --TGIKVRSR--SHGLSMAHRKGFQVLQGISEDVPHRLLDLNMKEYTGFQVALLNKDLKPQTFRN 543

  Fly   567 PFDIPRRDLVEEIAKMRETLLRPVSLVAK----DSGHCLPIAEMGNYQEYLKNKDNPLREIEPTN 627
            .:|||||:|::.:.:||..||:......|    |..|.:|||:|||||||||...:||||::|..
Mouse   544 AYDIPRRNLLDHLTRMRSNLLKSTRKFLKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQ 608

  Fly   628 VRQ-HMFGNPYKKDKHMVMVDEADLSDVAPMKSPNGNGPGGAPPGSPSGSGSPTGPGPSSPGSSP 691
            .|: |.||||:|.||..:|:|||| ..||                           ||.:....|
Mouse   609 PRRLHTFGNPFKLDKKGMMIDEAD-EFVA---------------------------GPQNKHKRP 645

  Fly   692 GGGSGPGMPGMPGMGGGMSGLMLGAGGSGGSSKKLDGTSRGRKRKAGPLPRSFEFRRSS--TDSR 754
            |   .|.|.|:|                            .|:|.|.||.|.   ||.|  .:|.
Mouse   646 G---EPSMQGIP----------------------------KRRRCASPLLRG---RRQSPAVNSH 676

  Fly   755 SSSSGSESSTTGSAPG--SPIPGATSSISGCDSAMGADGGPSSSCFDEDSNSNSSFVSSTSEASA 817
            ....|..:..|.:.||  .|:|....:                        :|.|.|....|...
Mouse   677 IGGKGPPAPMTQAQPGLIKPLPLHKEA------------------------TNDSIVDDVVENHV 717

  Fly   818 SDSGMSNSHLDPLRISFVFIEE-----ETSDQDTPLNGYVHNFINGISDDAETGETEAVPGGASL 877
            :|  ..:|.:.|..:...|:..     |.|...|...|:.|           .|..:...||...
Mouse   718 AD--QLSSDMTPNAMDTEFLTSPPNLLEPSTNHTEALGHEH-----------LGNNDLTVGGFLE 769

  Fly   878 PGASSANEPSSIGAS-PAVSATPATSVIPASNGSEVCSAVAAGSSSSISSSASSPGVLYVPLNGL 941
            ......|:..|...: ||.|......::...:..||.:.:.|    .|......||..|..:..|
Mouse   770 NHEEPRNKEQSAEENIPASSLNKGKKLMHCRSHEEVNTELKA----QIMKEIRKPGRKYERIFTL 830

  Fly   942 TTH 944
            ..|
Mouse   831 LKH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS6NP_001259259.1 vWFA 4..>147 CDD:238119 92/142 (65%)
INT_SG_DDX_CT_C 1196..1257 CDD:291946
Ints6XP_006518743.1 VWA_2 4..131 CDD:379234 88/129 (68%)
INT_SG_DDX_CT_C 807..865 CDD:373727 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850780
Domainoid 1 1.000 341 1.000 Domainoid score I1081
eggNOG 1 0.900 - - E1_KOG3768
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 571 1.000 Inparanoid score I1054
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003020
OrthoInspector 1 1.000 - - otm44345
orthoMCL 1 0.900 - - OOG6_103620
Panther 1 1.100 - - LDO PTHR12957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3035
SonicParanoid 1 1.000 - - X2010
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.780

Return to query results.
Submit another query.