DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx27 and SNX17

DIOPT Version :10

Sequence 1:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_055563.1 Gene:SNX17 / 9784 HGNCID:14979 Length:470 Species:Homo sapiens


Alignment Length:397 Identity:101/397 - (25%)
Similarity:171/397 - (43%) Gaps:48/397 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 SIPDYGIVNRNGE----RYIVFNIHMAGRQLCSRRYREFANLHSLLRKEFSGFNFPKLPGKWPFQ 231
            |||:  ..:|:|:    .|:.:|||:.|...|..||.:...||..||||:.....|..|.|..|.
Human     4 SIPE--TESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS 66

  Fly   232 LSEQQLDTRRRGLEQYLEKVCAVRVIAESDAVQDFLTDTEDDISASP---VDIKVMLPDHEVSTV 293
            |:..:::.||..||:|::.|....::..|:....||...:.:....|   |.::|:|.:.:...|
Human    67 LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQ
QETQQVPTEEVSLEVLLSNGQKVLV 131

  Fly   294 SVKKSSNAQVVWEILVQRANLTAYTQQYFYLFEIVE-----YNFERKLQPHEIPH----QLYVQN 349
            :|..|...:.|.|.:..:.:|......||.||.:.|     ::|.||||..|:|:    .|..|.
Human   132 NVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQE 196

  Fly   350 YSTASSTCLCVRRWLFSVAKELTLPDGEQAGRFIFYQAVDEVNRGNIRADGRLY-ELKALQDAKK 413
            |.      :.:|:..:..|.:..:.:.......::.|.|.::.||.|......: :||:||:...
Human   197 YK------IVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVS 255

  Fly   414 AGDYLALARTLPGYGDVVFPHCSCD-SRKEGHVVPAVGMKSFRL------HACREDGSLEAQMVE 471
            ..::|.||:||..||.:.|..|..| ..|:..||.:.|.....|      ...|| ||.....:.
Human   256 KKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLRE-GSFRVTRMR 319

  Fly   472 LTWDSITRS-------------ESDEESMSFCFQYNRPDKPARWVKVYTPYHAFLADCFDRIMEE 523
             .| .:|.|             ...|..:...|:|.......:||.:.:|....::.|...:::|
Human   320 -CW-RVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDE 382

  Fly   524 RKWEDSG 530
            ...:.||
Human   383 LMVKKSG 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx27NP_727023.1 PDZ_SNX27-like 47..139 CDD:467283
PX_SNX27 165..270 CDD:132796 33/102 (32%)
FERM_F1_SNX27 277..368 CDD:340475 26/102 (25%)
FERM-like_C_SNX27 428..528 CDD:270146 24/119 (20%)
SNX17NP_055563.1 PX_SNX17_31 2..106 CDD:132795 33/103 (32%)
FERM-like. /evidence=ECO:0000269|PubMed:39587083 115..432 67/284 (24%)
FERM_F1_SNX17 115..207 CDD:340538 25/97 (26%)
FERM-like_C_SNX17 269..388 CDD:270145 25/121 (21%)
PTB-like F3 module 270..432 26/123 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..426
Interacts with the retriever complex. /evidence=ECO:0000269|PubMed:39587083 458..470
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.