DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx27 and SNX27

DIOPT Version :9

Sequence 1:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001317652.1 Gene:SNX27 / 81609 HGNCID:20073 Length:541 Species:Homo sapiens


Alignment Length:525 Identity:280/525 - (53%)
Similarity:389/525 - (74%) Gaps:10/525 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GEN-HPLPTPTPASAVVTASSGGGGGGAVVMGVGVGVTTANGPRVVTIYKTETGFGFNVRGQVSE 68
            ||. ||       ||......||||||:.:...|.|.....|||||.|.|:|:|:||||||||||
Human     6 GEGIHP-------SAPHRNGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVSE 63

  Fly    69 GGQLRSINGELYAPLQHVSAVLENGAAEKAGIKKGDRILEVNGVSVEGATHKQVVDLIKSGGDCL 133
            ||||||||||||||||||||||..|||::||::|||||||||.|:|||||||||||||::|...|
Human    64 GGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNHVNVEGATHKQVVDLIRAGEKEL 128

  Fly   134 TLTVISVTQQEADRLEPQEDQSGYSYIDYSDKRSLPISIPDYGIVNRNGERYIVFNIHMAGRQLC 198
            .|||:||...|||.|:|.:|..|.|:.||::|:::|||:|.|..|.:|||:::|:|::|||||||
Human   129 ILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPRYKHVEQNGEKFVVYNVYMAGRQLC 193

  Fly   199 SRRYREFANLHSLLRKEFSGFNFPKLPGKWPFQLSEQQLDTRRRGLEQYLEKVCAVRVIAESDAV 263
            |:||||||.||..|::||:.|.||:|||||||.|||||||.||||||:||||||::|||.|||.:
Human   194 SKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIM 258

  Fly   264 QDFLTDTEDDIS-ASPVDIKVMLPDHEVSTVSVKKSSNAQVVWEILVQRANLTAYTQQYFYLFEI 327
            |:||::::::.: .|.|:::|.|||....||.|||:|....|::.:..:..:.:.|..||.|||:
Human   259 QEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEV 323

  Fly   328 VEYNFERKLQPHEIPHQLYVQNYSTA-SSTCLCVRRWLFSVAKELTLPDGEQAGRFIFYQAVDEV 391
            :.::|.|||.|:|.||:||:|||::| ..|||.:|:|||:..:|:.|.|.:.|..:.|:||||:|
Human   324 ISHSFVRKLAPNEFPHKLYIQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDV 388

  Fly   392 NRGNIRADGRLYELKALQDAKKAGDYLALARTLPGYGDVVFPHCSCDSRKEGHVVPAVGMKSFRL 456
            .:|.|:|:.:.|:|:.|.:.:|...||.:.||..||.:::||||:||||::|||:.|:.:..|:|
Human   389 KKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKL 453

  Fly   457 HACREDGSLEAQMVELTWDSITRSESDEESMSFCFQYNRPDKPARWVKVYTPYHAFLADCFDRIM 521
            |||.|:|.||.|::...||.:.|.::|||.|:|||:|.|.:|..||||::|||..::.:||:|:.
Human   454 HACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVF 518

  Fly   522 EERKW 526
            .|.||
Human   519 CELKW 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx27NP_727023.1 PDZ_signaling 46..138 CDD:238492 72/91 (79%)
PX_SNX27 165..270 CDD:132796 69/104 (66%)
UBQ 278..363 CDD:294102 36/85 (42%)
FERM-like_C_SNX27 428..528 CDD:270146 48/99 (48%)
SNX27NP_001317652.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 15/42 (36%)
PDZ_signaling 41..133 CDD:238492 72/91 (79%)
PX_SNX27 160..265 CDD:132796 69/104 (66%)
FERM_F1_SNX27 273..365 CDD:340475 40/91 (44%)
FERM-like region F1 273..362 38/88 (43%)
FERM-like region F2 373..421 17/47 (36%)
FERM-like_C_SNX27 425..526 CDD:270146 48/99 (48%)
FERM-like region F3 425..525 48/99 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146027
Domainoid 1 1.000 177 1.000 Domainoid score I3609
eggNOG 1 0.900 - - E1_KOG3784
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12797
Inparanoid 1 1.050 591 1.000 Inparanoid score I985
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52273
OrthoDB 1 1.010 - - D193838at33208
OrthoFinder 1 1.000 - - FOG0006537
OrthoInspector 1 1.000 - - oto91504
orthoMCL 1 0.900 - - OOG6_107041
Panther 1 1.100 - - LDO PTHR12431
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 1 1.000 - - X4771
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.