DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx27 and snx14

DIOPT Version :9

Sequence 1:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_005160372.1 Gene:snx14 / 555970 ZFINID:ZDB-GENE-040724-144 Length:942 Species:Danio rerio


Alignment Length:543 Identity:115/543 - (21%)
Similarity:182/543 - (33%) Gaps:181/543 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LYAPLQHVSAVLEN------------------GAAEKAGIKKGDRILEVN------------GVS 113
            |:...:||..:||.                  ||...|...|.:|.|.::            |:|
Zfish   438 LFEAYEHVLCLLEKVFTPMFCHSDEYFRHLLCGAESPARNSKLNRNLSLDDLRNTSKRGESFGIS 502

  Fly   114 VEGATHKQVVDLIKSGGDCLTLTVISVTQQEADRLEP-----QEDQSG----------------- 156
            ..|:..|.|..  .|..:...|...::.:.|.|.:|.     ::|..|                 
Zfish   503 RIGSKIKGVFK--SSTMEGAMLPQYAMIEGEDDTVEEAVMVFEDDSPGPMDAVGTPGTLRNLSAW 565

  Fly   157 ---YSYIDYSD----KRSLPISIPDYGIVNRNGERYIVFNI-HMAGRQLCSRRYREFANLHSLLR 213
               ..|:|:.|    |..:|:...|   |.||..:    |: |........|:|.||..|.|.| 
Zfish   566 TISIPYVDFYDDEVKKERIPVFCID---VERNDRK----NVGHETESWSVYRKYVEFYVLESKL- 622

  Fly   214 KEFSG-FNFPKLPGK-------WPFQLSEQQLDTRRRGLEQYLEKVCAVRVIAESDAVQDFLTDT 270
            .||.| |...:||.|       :.|      |.::|...|:||:|:.....::.|..:.|||   
Zfish   623 TEFHGPFQDAQLPSKRIIGPKNYEF------LSSKRGEFEEYLQKLLHHPELSNSQLLADFL--- 678

  Fly   271 EDDISASPVDIK-----VMLPDHEVSTVSVKKSSNAQVVWEILVQRANLTAYTQQYFYLFEIVEY 330
                  ||..::     .||||  |:...:.||...:::.|   :..||..:.|.:|...|..:.
Zfish   679 ------SPFSMESQFRDKMLPD--VNLGKIFKSVPGKLIKE---KGQNLEPFIQSFFSSCESPKP 732

  Fly   331 NFERK----LQP-----HEIPHQLYVQNYSTASSTCLCVRRWLFSVAKELTLPDG----EQAGRF 382
            ...|.    |.|     .::.::||..|                     ..||:|    .....|
Zfish   733 KPSRPELTILSPTAENNKKLFNELYRNN---------------------ANLPEGLEKKHNQNYF 776

  Fly   383 IFYQAVD-------EVNRGNIRADGRLYELKALQDAKKAGDYLALARTLPGYGDVVFPHCSCDSR 440
            :....||       .:.|...|....|:.|       .:|..:.|.|||..|             
Zfish   777 MELMEVDGAYDYMMYIGRVVFRMPDWLHHL-------LSGVRILLKRTLEAY------------- 821

  Fly   441 KEGHVVPAVGMKSFRLHACREDGSLEAQMVELTWDSITRSESDEESMSFCFQYNRPDKPARWVKV 505
             .||..      .::|....|:..| ..:|.|..|::....::|.|..        ||..|..:.
Zfish   822 -VGHYF------QYKLEQIMEEHRL-VSLVTLLRDAVFCESTEERSPE--------DKQRRAKQT 870

  Fly   506 YTPYHAFLADCFDR-IMEERKWE 527
            :.....:|.|...: |.||.|::
Zfish   871 FEEMMNYLPDIVGKCIGEEAKYD 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx27NP_727023.1 PDZ_signaling 46..138 CDD:238492 18/88 (20%)
PX_SNX27 165..270 CDD:132796 33/113 (29%)
UBQ 278..363 CDD:294102 20/98 (20%)
FERM-like_C_SNX27 428..528 CDD:270146 19/101 (19%)
snx14XP_005160372.1 PXA 130..299 CDD:280373
RGS_SNX14 339..465 CDD:188677 5/26 (19%)
PX_SNX14 563..681 CDD:132787 37/140 (26%)
Nexin_C 802..905 CDD:285792 27/128 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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