DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx27 and snx27b

DIOPT Version :9

Sequence 1:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_956834.1 Gene:snx27b / 393512 ZFINID:ZDB-GENE-040426-1529 Length:569 Species:Danio rerio


Alignment Length:528 Identity:276/528 - (52%)
Similarity:385/528 - (72%) Gaps:2/528 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSIVGENHPLPTPTPASAVVTASSGGGGGGAVVMGVGVGVTTANGPRVVTIYKTETGFGFNVRGQ 65
            |:.|.|.....:..|::....|.:|.|.......|..|..|..:|||:|.|.|:::|:|||||||
Zfish     1 MADVVEGDGTRSAAPSAIHSAARNGSGMSAGTCAGGLVATTVTSGPRLVRIVKSDSGYGFNVRGQ 65

  Fly    66 VSEGGQLRSINGELYAPLQHVSAVLENGAAEKAGIKKGDRILEVNGVSVEGATHKQVVDLIKSGG 130
            |||||||||||||||||||||||||..|||::|||.|||||||||||:|||||||||||||::|.
Zfish    66 VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHKQVVDLIRAGE 130

  Fly   131 DCLTLTVISVTQQEADRLEPQEDQSGYSYIDYSDKRSLPISIPDYGIVNRNGERYIVFNIHMAGR 195
            ..|.|.|:||.|.|.|.|:|.:|.|..|..|||||:::|||:|.|..|.::||:::|:|::||||
Zfish   131 KELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQSGEKFVVYNVYMAGR 195

  Fly   196 QLCSRRYREFANLHSLLRKEFSGFNFPKLPGKWPFQLSEQQLDTRRRGLEQYLEKVCAVRVIAES 260
            ||||:||||||.||..|::||:.|.||||||||||.|||||||.||||||:||||||:||||.||
Zfish   196 QLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDARRRGLEEYLEKVCSVRVIGES 260

  Fly   261 DAVQDFLTDTEDDIS-ASPVDIKVMLPDHEVSTVSVKKSSNAQVVWEILVQRANLTAYTQQYFYL 324
            |.:|:||::::::.: .|.|::::.:||....||.|:|:.....|::.:|.:..:.:.|..||.|
Zfish   261 DIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNCTTDQVYQAVVTKIGMDSITASYFAL 325

  Fly   325 FEIVEYNFERKLQPHEIPHQLYVQNYSTA-SSTCLCVRRWLFSVAKELTLPDGEQAGRFIFYQAV 388
            ||::.:.|.|||.|:|.||:||||||::| ..|||.:|:|||:..:|:.|.|.|.|..:.|:||:
Zfish   326 FEVINHTFARKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFTTEEEILLNDNELAINYCFHQAL 390

  Fly   389 DEVNRGNIRADGRLYELKALQDAKKAGDYLALARTLPGYGDVVFPHCSCDSRKEGHVVPAVGMKS 453
            |:|.:|.|:...:.|:|:.|.:.:|...||::.||..||.::.|||||||||::|||:.|:.::.
Zfish   391 DDVKKGFIKVGEKSYQLQKLTEQRKMTMYLSILRTCEGYNEITFPHCSCDSRRKGHVITAISIRH 455

  Fly   454 FRLHACREDGSLEAQMVELTWDSITRSESDEESMSFCFQYNRPDKPARWVKVYTPYHAFLADCFD 518
            |:||||.|||:||.|::...|..:.|.::|||.|:|||:|.|.:|..||||::|||..::.:||:
Zfish   456 FKLHACTEDGTLENQVIAFDWSEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFE 520

  Fly   519 RIMEERKW 526
            |:..|.||
Zfish   521 RVFCELKW 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx27NP_727023.1 PDZ_signaling 46..138 CDD:238492 71/91 (78%)
PX_SNX27 165..270 CDD:132796 70/104 (67%)
UBQ 278..363 CDD:294102 34/85 (40%)
FERM-like_C_SNX27 428..528 CDD:270146 49/99 (49%)
snx27bNP_956834.1 PDZ_signaling 46..138 CDD:238492 71/91 (78%)
PX_SNX27 165..270 CDD:132796 70/104 (67%)
SNX27_RA 279..365 CDD:176372 34/85 (40%)
FERM-like_C_SNX27 430..531 CDD:270146 49/99 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579558
Domainoid 1 1.000 176 1.000 Domainoid score I3567
eggNOG 1 0.900 - - E1_KOG3784
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12797
Inparanoid 1 1.050 584 1.000 Inparanoid score I970
OMA 1 1.010 - - QHG52273
OrthoDB 1 1.010 - - D193838at33208
OrthoFinder 1 1.000 - - FOG0006537
OrthoInspector 1 1.000 - - otm26413
orthoMCL 1 0.900 - - OOG6_107041
Panther 1 1.100 - - LDO PTHR12431
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 1 1.000 - - X4771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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