DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx27 and snx27

DIOPT Version :10

Sequence 1:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_031746759.1 Gene:snx27 / 100170579 XenbaseID:XB-GENE-959088 Length:547 Species:Xenopus tropicalis


Alignment Length:505 Identity:278/505 - (55%)
Similarity:381/505 - (75%) Gaps:13/505 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGGGGGGAVVMGVGVGVTTANGPRVVTIYKTETGFGFNVRGQVSEGGQLRSINGELYAPLQHVSA 88
            :||||.|:|           .|||||.|.|:|:|:||||||||||||||||||||||||||||||
 Frog    15 NGGGGFGSV-----------GGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSA 68

  Fly    89 VLENGAAEKAGIKKGDRILEVNGVSVEGATHKQVVDLIKSGGDCLTLTVISVTQQEADRLEPQED 153
            ||..|||::|||:|||||||||||:|||||||||||||::|...|.|||:||...||:.|:|.:|
 Frog    69 VLPGGAADRAGIRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELVLTVLSVPPHEAENLDPSDD 133

  Fly   154 QSGYSYIDYSDKRSLPISIPDYGIVNRNGERYIVFNIHMAGRQLCSRRYREFANLHSLLRKEFSG 218
            .||.|:.||::|:::|||||.|..|.:|||:::|:|::||||||||:||||||.|:..|::||:.
 Frog   134 SSGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILNQNLKREFAN 198

  Fly   219 FNFPKLPGKWPFQLSEQQLDTRRRGLEQYLEKVCAVRVIAESDAVQDFLTDTEDDIS-ASPVDIK 282
            |.||:|||||||.|||||||.||||||:||||||::|||.|||.:|:||::::::.: .|.|:::
 Frog   199 FTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELR 263

  Fly   283 VMLPDHEVSTVSVKKSSNAQVVWEILVQRANLTAYTQQYFYLFEIVEYNFERKLQPHEIPHQLYV 347
            :.|||....||.|||:|....|::.|..:..:...|..||.|||::.::|.|||.|:|.||:|||
 Frog   264 IALPDKSTVTVRVKKNSTTDQVYQALTAKIGMDGITANYFALFEVINHSFVRKLAPNEFPHKLYV 328

  Fly   348 QNYSTA-SSTCLCVRRWLFSVAKELTLPDGEQAGRFIFYQAVDEVNRGNIRADGRLYELKALQDA 411
            |||::| ..|||.||:|||:.::|..|.|.:.|..|.|:||||:|.||.|:|:.:.|:|:.|.:.
 Frog   329 QNYTSAVPGTCLTVRKWLFTTSEEALLKDNDLAVSFFFHQAVDDVKRGYIKAEDKSYQLQKLCEQ 393

  Fly   412 KKAGDYLALARTLPGYGDVVFPHCSCDSRKEGHVVPAVGMKSFRLHACREDGSLEAQMVELTWDS 476
            :|...||.:.|...||.:::||||:||||::||||.|:.:|.|:|.||.|:|.||.|::...||.
 Frog   394 RKMLMYLNMLRGCDGYNEIMFPHCACDSRRKGHVVTAISIKHFKLLACTEEGQLENQVIAFEWDE 458

  Fly   477 ITRSESDEESMSFCFQYNRPDKPARWVKVYTPYHAFLADCFDRIMEERKW 526
            :.|.::|||.|:|||:|.|.:|..||||::|||..::.:||:|:..|.||
 Frog   459 MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKW 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx27NP_727023.1 PDZ_SNX27-like 47..139 CDD:467283 74/91 (81%)
PX_SNX27 165..270 CDD:132796 69/104 (66%)
FERM_F1_SNX27 277..368 CDD:340475 42/91 (46%)
FERM-like_C_SNX27 428..528 CDD:270146 49/99 (49%)
snx27XP_031746759.1 PDZ_SNX27-like 27..119 CDD:467283 74/91 (81%)
PX_SNX27 145..250 CDD:132796 69/104 (66%)
FERM_F1_SNX27 258..350 CDD:340475 42/91 (46%)
FERM-like_C_SNX27 410..511 CDD:270146 49/99 (49%)

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